Vibrio splendidus: LTQ54_09045
Help
Entry
LTQ54_09045 CDS
T08240
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03420
Nucleotide excision repair
vsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LTQ54_09045 (uvrD)
03430 Mismatch repair
LTQ54_09045 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_09045 (uvrD)
Enzymes [BR:
vsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LTQ54_09045 (uvrD)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LTQ54_09045 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LTQ54_09045 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
UOE83156
LinkDB
All DBs
Position
1:1979692..1981866
Genome browser
AA seq
724 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLQSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
IRLLRRLIKAQNLDEKQWPAKQASWWINGKKDEGLRPSHIDAYHDPITQTWLKIYSAYQE
ACDRAGLVDFAEILLRSHELLRDKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
DCRVMIVGDDDQSIYGWRGAKIENIQKFLDEFPGASTVRLEQNYRSTKTILQASNELISN
NTERMGKELWTDGNDGEPISVYSAYNELDEARFTVSKIKEWQEKGGALEDTAMLYRNNAQ
SRVLEEALIQGGLPYRIYGGMRFFERQEIRDALSYLRLMSNRSNDAAFERVVNTPTRGLG
DKTLETIRLAARDRGATMWQASIALIEEQVLPGRAAGALSRFIELINALEDDTIELRLHE
QTDHVIKSSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQTAVKENFNETGFSLGSRVKHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAR
LEQL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatagatccttcgcttttactcgatggcctaaacgataaacaacgtgaggcggtcgca
gcacctttagaaaacctacttattctggcaggtgctggcagtggtaaaacgcgagtgttg
gtgcatcgcatcgcttggctgcaaagcgtagagcaagcatcgccgttctctatcatgtcg
gttaccttcaccaacaaagcggcagcagagatgcgtggtcgtattgaagagttgatgatg
ggtagctcgtcaggcatgtggaacggtaccttccacggtatttgtcaccgcatccttcgt
gctcactacctcgatgcaaaactgccagaagatttccagatcattgattcagatgatcag
attcgtttgctacgccgcttaatcaaggcgcaaaaccttgatgaaaaacagtggcctgcc
aagcaagcttcttggtggatcaatggcaagaaagacgaagggctacgcccaagtcacatt
gacgcctaccatgatccaataactcaaacatggttaaagatctattctgcttaccaagaa
gcatgtgaccgtgctggcttggtcgactttgcggaaatcttgttgagatcgcatgaacta
ttgcgtgataagaaacacatccgagagcactaccaagctcgcttcaagcatatccttgtc
gacgaatttcaagataccaacaacatccaatacgcttggttacgtatgatggcgggcccg
gattgtcgcgtgatgatcgtgggtgatgatgaccaatctatctatggttggcgtggtgcc
aagattgaaaatattcagaagttcttggatgaattcccaggcgcttcaacggttcgactc
gaacaaaactaccgttcaaccaaaaccattctgcaggcgtcgaacgagcttatctcgaac
aacactgagcgtatgggtaaagagctgtggaccgatggcaacgatggcgagccaatctca
gtttactcggcttataacgagttagatgaagcgcgtttcacggtcagcaaaatcaaagag
tggcaagagaaaggcggtgcgctagaagataccgcgatgctgtatcgtaacaatgcccaa
tctcgtgtgcttgaagaagctttgattcaaggtggtctaccttaccgaatctatggcggc
atgcgattcttcgagcgtcaagaaatcagagatgccttgagctacctgcgcttaatgagt
aaccgcagcaatgatgcggcattcgaacgtgtcgtcaatacgccaacgcgtggtttgggt
gataaaacgttagaaacgattcgtcttgcggcgcgtgaccgtggtgcaaccatgtggcaa
gccagtattgctctgatagaagagcaagtgcttccaggccgtgctgcgggtgcattgagc
cgctttatcgagcttatcaatgcgcttgaagatgacaccatagaactgaggcttcatgag
caaaccgaccacgtgatcaaatcgtcgggcttgtttgcgatgtacgagcaagagaagggc
gagaagtcgaaggcgcgtattgagaacttggaagaattagtaacggcaacgcgtcagttt
gaaaaaccagaagaagcggatgaaatgagcatgctaacagcattcttaactcatgcggct
ttggaagcgggtgaaggccaagctgatgagtttgatgatgcggttcagctcatgactctg
cacagtgccaaaggcctagagttcccaatggtattcatggtgggtgtggaagaaggtatg
ttcccaagccagatgtcagcagaagaagcagggcgcttagaagaagagcgtcgcctgtgt
tacgtaggcatgacgcgtgcgatggagaagctttacatcacttacgcagagatgcgtcgc
ttgtacgggcaagacaagtaccacaaaccgtcacgctttattcgtgaactaccagagaca
tgtctggatgaggttcgtatgaaagcgcaagtgagtcgtcctgctagcagtggccgcttt
agccaaaccgccgtgaaagagaactttaacgaaacaggatttagtttgggttctcgcgtt
aagcaccctaagtttggtgaaggcactatcatcaacttcgagggaagtggcccgcagagc
cgagttcaagtcgcgtttaacggtgaaggcatcaagtggttagtaacggcttatgctcgt
ttagaacagttgtaa
DBGET
integrated database retrieval system
