Vibrio splendidus: LTQ54_09935
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Entry
LTQ54_09935 CDS
T08240
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTQ54_09935 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_09935 (priA)
Enzymes [BR:
vsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LTQ54_09935 (priA)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTQ54_09935 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
AAA_19
TrwB_AAD_bind
HTH_27
Zot
AAA_11
DUF1258
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UOE83298
LinkDB
All DBs
Position
1:complement(2177187..2179388)
Genome browser
AA seq
733 aa
AA seq
DB search
MRPMIARVALPVPLDKQFDYKIPNHLFPIIGGRVSVPFGRQTLTGIVTALVNESEFELDK
LKPIKALLDNQPVWPESVYSLLVWCSQFYQYPLGETLANALPSALRKGKAADFATLVEWQ
LTPSGRDQLMQGFGRAVKQAKVMHMLEHGPVPHQEFIDEEVGSAVLKTLEEKGWIESVEK
KPKRQPWPVELENEQDKPKLNAEQAIAIATVNSQTDFSCFLLEGVTGSGKTEVYLNMIKP
ILDQGKQALVLVPEIGLTPQTINRFKRRFNVPVEVIHSGLNDSERLNAWLSARDKIAGIV
IGTRSALFTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAIMRAHKAQIPVVLGSATPA
FETLHNAQIGKYSYLTLTSRAGVALPTTNKVLDVKGEYLESGLSASLIAEMQRHLKAGNQ
VMLFLNRRGFSPALMCHDCGWTAECKRCDAYYTYHQYSNEMRCHHCGSQQHIVHNCQGCG
SANLVTVGVGTEQLEAQLGQLFPEYKTIRIDRDSTRRKGSLESALESIRKGEYQILIGTQ
MLAKGHHFPDVTLVALLDVDASLYSSDFRASERLAQLFTQVAGRAGRASKPGEVILQTHH
PEHGLLQALLHKDYNHFAQTALAERKQAMLPPYTFMTLFRAEANDTRLVEEFLRQVRHTL
ESHPLFDQYCMVLGPTPAPLAKRAGKSRWQLILQTQTRSLMQKLLMSAKPAINMLPAAKK
VRWSLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaatgattgcccgcgtggcactgcctgttccactagacaagcagttcgattac
aagattcctaaccacctattcccgattattggtggacgagtctctgtgccttttggacga
caaaccttaacaggtattgttacagctctggttaacgaatctgaattcgagctagacaag
ctcaagcccattaaagccttattagacaaccaacccgtttggccagaatcggtctactca
ctcttggtatggtgcagccagttctatcagtatccactgggggaaaccttggctaatgct
ctaccaagcgctttacgaaaaggcaaagctgccgacttcgcaacgcttgtcgagtggcaa
ttgaccccatcaggcagagatcaactgatgcaaggctttggtcgtgcggttaagcaagcc
aaagtgatgcacatgcttgagcacggccctgttcctcatcaagaattcattgatgaggaa
gtcggcagcgcggtgcttaagacgttggaagagaaaggttggattgagtcggtagagaaa
aagccaaagcgccaaccgtggccagtggaacttgaaaacgaacaagacaagccgaagctc
aatgctgaacaagcgatcgcgattgcaacagtaaatagccaaaccgattttagttgcttc
ttgctagaaggggttaccggctcaggtaagaccgaagtctacctgaatatgatcaagccg
attctcgaccaaggtaaacaagcgttagtcttggtaccggaaataggcctcactccacaa
acgattaatcgctttaagcgtcgttttaatgtgcctgttgaggtgattcactctggatta
aacgattctgaacgactgaatgcttggttatcggcgcgcgataaaatagcgggcattgtg
attggtacgcgctcagctctgttcacccccttcgctgatctgggaattatcattgtcgat
gaagagcacgacgcctcttataagcagcaagatagcctacgctaccacgctcgtgatgta
gcgatcatgcgtgctcataaagcgcagattccggttgtgttaggctcggcgactccggcc
tttgagacgctgcacaacgcacagatcggtaaatacagttacctcaccctgacctcacgc
gcgggtgtcgcactgccgaccaccaataaggtgttggatgttaaaggtgaatatctagaa
agtggcttgtctgcgtcgttgattgctgaaatgcaaagacacctcaaagcaggcaaccaa
gtgatgttgtttctcaaccgtcgtgggttctctcccgcactgatgtgtcacgattgtggt
tggacagccgaatgtaagcgctgtgatgcctactacacctatcaccagtacagtaatgaa
atgcgctgccaccattgtggttcgcaacagcatatcgtgcacaattgccaaggctgtggt
tcagctaacttggtgacggtgggtgtaggtaccgaacagttagaggctcaacttggtcag
ctattccctgaatacaaaaccattcgtattgaccgagacagtacccgccgcaaaggcagc
ttagaaagtgcgttagagtcgattcgtaagggtgaataccaaatactgatcggtacacag
atgcttgctaaaggtcaccactttcctgacgtgacacttgtggcgttattggatgttgac
gcctctttatatagtagtgacttccgcgcctctgaacggttggctcaactgtttactcaa
gtcgccggtcgagcaggccgtgccagtaagccgggtgaggttatcttacaaactcaccat
ccagaacatggcttgttacaagcgttgctgcacaaagactataaccactttgcccaaacc
gcattggccgagcgtaaacaagcgatgctgccaccttatacctttatgactctgtttaga
gcggaagccaatgacacacgtttggtggaagagttcttacgtcaggttcgtcatacatta
gaatcgcaccccttgtttgaccaatattgcatggttctaggccccaccccagcgccactg
gccaagcgagcgggtaaatcacgctggcagttgattctacaaactcagactcgttcgtta
atgcagaagttattaatgagtgcgaagccggcaattaatatgttacctgctgcgaaaaaa
gtccgttggtcactcgatattgagccgcaagatttgagctaa
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