Vibrio splendidus: LTQ54_11170
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Entry
LTQ54_11170 CDS
T08240
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsl03019
]
LTQ54_11170 (rnc)
03009 Ribosome biogenesis [BR:
vsl03009
]
LTQ54_11170 (rnc)
03036 Chromosome and associated proteins [BR:
vsl03036
]
LTQ54_11170 (rnc)
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LTQ54_11170 (rnc)
Messenger RNA biogenesis [BR:
vsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LTQ54_11170 (rnc)
Ribosome biogenesis [BR:
vsl03009
]
Eukaryotic type
90S particles
RNase
LTQ54_11170 (rnc)
Prokaryotic type
rRNA processing factors
LTQ54_11170 (rnc)
Chromosome and associated proteins [BR:
vsl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LTQ54_11170 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UOE83514
LinkDB
All DBs
Position
1:2408310..2408987
Genome browser
AA seq
225 aa
AA seq
DB search
MNSPIDKLERKIGYQFNDADLIHLALTHRSAAGKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFELGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AVYLDSDTEVVRRIILSWYQSRLESIQPGVSQKDPKTRLQEFLQGRRNPLPVYTVTNIKG
EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLSNV
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaattgataaactagagagaaagattggctatcagtttaatgatgccgat
cttatccatttggcgctgactcaccgtagcgccgcaggtaaacacaacgaacgtcttgag
tttctgggcgattcaattttaagttttgttatcgctgatgatctttaccaccgtttccct
aaggtaaacgaaggtgatatgagccgcatgcgcgcaacattagtacgtggtcatacattg
gcagaactaggtcgtgaattcgaactaggagattacttaaaattaggtccaggtgagttg
aagagtggcggtttccgtcgtgattctattctagcggatgcggttgaagcgatcatcggc
gctgtctatttagatagtgataccgaggttgttcgccgtattattttaagctggtaccaa
tctcgcctagagtctattcagcctggtgtatctcaaaaagatccgaaaactcgcttacaa
gagtttttacaaggtcgaagaaatcccctacctgtctacacagtgactaatattaaaggt
gaagcacacaaccaagagtttacggttgagtgtgaagtggcaggtgtggataaacctgtt
atcggtaaaggcactagccgccgcaaggcagaacaagcggctgctgaaacagcattagag
caactaagcaatgtctga
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