Vibrio splendidus: LTQ54_11240
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Entry
LTQ54_11240 CDS
T08240
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsl03016
]
LTQ54_11240 (truD)
Enzymes [BR:
vsl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LTQ54_11240 (truD)
Transfer RNA biogenesis [BR:
vsl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LTQ54_11240 (truD)
Prokaryotic type
LTQ54_11240 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
CYNS_N
Motif
Other DBs
NCBI-ProteinID:
UOE83526
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All DBs
Position
1:2424890..2425936
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AA seq
348 aa
AA seq
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MSDILSSLAYLNGKPTAKAKLKAKAEHFVVNEDLGFEFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGEPDFSAFLAQYPSIEILATARHN
KKLRPGDLVGNQFELTLSEVTDCEDVVKRLEKVAQVGVPNYFGAQRFGNEGNNLSEARRW
GRENVRTRNQNKRSLYLSAARSWIYNLILSDRIEQDAFASALVGDIVVKDGAQLAVTADN
IEAVNQDIANGSAFITVALAGDNALPTTDASQALEQKHLDAEPDLMALICGNRMRHDRRE
ASLKPMGLTWEVNEDNVTLKFSLDAGCFATAIVRELVEEVHVERSYEQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcttcattggcttacctaaacggtaaaccaactgcgaaagcaaaa
ctaaaagcaaaagccgaacactttgtcgttaatgaagacttgggttttgagtttactggt
gaaggcgagcacctaatggtgcgtattcgtaaaactggtgagaacacgagcttcgtagca
aacgagctggctaaagcgtgtggtgttaagtcgaaagacgtgagctgggctggtttgaaa
gaccgtcatgctgtgacagaacagtggttgagtgtgcatctaccaaaaggtgaacctgac
ttttctgcttttctcgcacaatacccaagcattgagatcttggcgacagcacgtcacaac
aaaaagttacgtccaggcgatttagttggcaaccaattcgagctaactttgtctgaagta
acggattgtgaagatgtggtaaagcgtttagaaaaagtcgctcaagtaggcgtgccaaat
tacttcggtgctcagcgctttggtaatgaaggtaacaacttatctgaagctcgtcgttgg
ggtcgtgaaaacgttcgtacgcgtaatcagaataagcgcagcttgtatctttctgcggct
cgttcttggatttacaacttaattctttctgaccgtattgagcaagatgcgtttgcgtcg
gcattggttggcgatattgtcgtgaaagacggcgctcaattagcggtaacagcggataac
atcgaagcggtaaaccaagacatcgcgaacggttctgcgtttattaccgttgctttagct
ggagataatgcgttaccgacgacggatgcgtctcaagctctagagcagaaacaccttgat
gctgaaccggatctaatggcgcttatctgtggtaaccgtatgcgccatgatcgccgtgaa
gcttcgttgaagccgatgggtttaacttgggaagtgaacgaagataatgtcactcttaag
ttctctctcgatgctggttgtttcgcaaccgctattgttcgtgaattggttgaagaagtt
cacgtagagagaagctacgagcaataa
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