Vibrio splendidus: LTQ54_11790
Help
Entry
LTQ54_11790 CDS
T08240
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LTQ54_11790 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsl03019
]
LTQ54_11790 (pnp)
03016 Transfer RNA biogenesis [BR:
vsl03016
]
LTQ54_11790 (pnp)
Enzymes [BR:
vsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LTQ54_11790 (pnp)
Messenger RNA biogenesis [BR:
vsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LTQ54_11790 (pnp)
Transfer RNA biogenesis [BR:
vsl03016
]
Prokaryotic type
tRNA degradation factors
LTQ54_11790 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH_SLS1_2
KH-I_KHDC4-BBP
Mt_ATP-synt_B
Motif
Other DBs
NCBI-ProteinID:
UOE83621
LinkDB
All DBs
Position
1:2552324..2554444
Genome browser
AA seq
706 aa
AA seq
DB search
MFEKPVVKSFQYGNHTVTLETGVMARQATAAVMATMDDTSVFVSVVAKKEAVAGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPSAFKNEVQVIATVVS
INPDVNPDMITMIATSAALAISGAPFNGPIGAARVGHIDGELVLNPSNTELENSKLDLVV
SGTEGAVLMVESEADNLSEEEMLSAVVYGHDQQQVVIKAINEFAAEVATPSWNWEAPAVN
TELKAKVAEQAETRLSDAYQITEKMARYEQVGAIKSDTVEALIAQDENLDEREIRGMLGS
LEKNVVRSRIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDSLMGEKKDNFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIQAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNAGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISSDKIKDVIGKGGAVIRALCEETGTTIEIEDDGTIKIAA
TEGAAAQEAIRRIEEITAEVEVGRIYQGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLTEGQEVPVKVLEIDRQGRVRLSMKEAVETPAEGEAPAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaaccagttgtaaaatcgttccagtacggtaaccacaccgttactctagaa
acgggcgtaatggcacgtcaagctactgctgctgtaatggcgactatggacgatacatca
gtattcgtttctgttgttgctaagaaagaagctgttgcaggccaagatttcttccctcta
acagttaactaccaagagcgtacatacgctgcgggtaaaatccctggtggtttcttcaag
cgtgaaggtcgtccttctgaaggcgaaacgctaacagctcgtctgattgaccgtccaatt
cgtccacttttcccaagtgcgtttaaaaacgaagttcaagttatcgctacggttgtttct
atcaaccctgacgtaaacccagacatgatcactatgatcgcaacgtctgctgcgcttgct
atctctggtgctccattcaatggtcctatcggtgctgcacgtgttggtcacatcgacggc
gaacttgttcttaacccatcaaatactgagcttgaaaactctaaactagacctagttgtg
tctggtacagaaggcgcagtacttatggttgaatctgaagcagataacctatctgaagaa
gaaatgctttcagctgttgtttacggtcacgaccaacaacaagttgtaatcaaagcaatc
aacgagtttgctgctgaagttgcaactccatcttggaactgggaagcgccagcagttaac
actgagcttaaagctaaagttgctgagcaagctgaaacacgtctatctgacgcgtaccag
atcactgagaaaatggcgcgttacgagcaagttggcgcaatcaagagcgacactgttgaa
gctctaattgcacaagacgaaaacctagatgagcgcgaaatccgcggcatgcttggttct
ctagagaaaaacgtagtacgtagccgcatcattgctggcaacccacgtatcgatggccgt
gaaaaagacatggttcgtgcgctagacgtacgtactggtgttcttccacgtacacacggt
tcttctctattcactcgtggtgaaactcaagcacttgttactgcaacgcttggtacacaa
cgtgatgctcaaatcatcgacagcctaatgggtgagaagaaagataacttccttctacac
tacaacttccctccatactgtgtaggtgaaactggtttcgttggttctcctaagcgtcgt
gaaattggtcacggtaagcttgctaaacgtggtatccaagcagtaatgccttctgttgac
gaattcccatacacagttcgtgttgtatcggaaatcacagaatctaacggttcttcttca
atggcttctgtatgtggtacatctctagcacttatggatgctggtgttccaatcaaagct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggagacgatttcgttgttctttct
gacatccttggcgatgaagatcacctaggtgacatggactttaaagtagcaggtactaac
gctggtatcactgcacttcaaatggacatcaagatcgaaggtatcactaaagagatcatg
caaattgctcttaaccaagcgcaaggtgcacgtaagcacatcctttctgtaatggatgaa
gctatctctggtgctcgtgaagatatctctgaattcgctccacgtatccacacaatgaaa
atcagctctgataagatcaaagatgttatcggtaaaggcggcgcagttatccgtgctctt
tgtgaagaaacaggtactacaatcgaaatcgaagacgatggcacaatcaagattgctgct
actgaaggcgcagctgctcaagaagctatccgtcgtatcgaagagatcactgctgaagtt
gaagttggccgcatttaccaaggtaaagttgctcgtctagctgacttcggtgcattcgtt
actatccttccaggtaaagatggtctagtacacatctctcaaatcgctgacaagcgtgtt
gagaaagtgtctgactacctaactgaaggtcaagaagttcctgttaaggttcttgaaatt
gaccgtcaaggccgcgttcgtctgagcatgaaagaagcagttgaaacgccagctgaaggc
gaagcacctgctgctgagtaa
DBGET
integrated database retrieval system
