Vibrio splendidus: LTQ54_11900
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Entry
LTQ54_11900 CDS
T08240
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_11900 (radA)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LTQ54_11900 (radA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
SLFN-g3_helicase
GvpD_P-loop
AAA
AAA_22
Rad51
RecA_N
AAA_14
ABC_tran
AAA_16
nSTAND_NTPase5
NTPase_1
nSTAND3
Viral_helicase1
Zeta_toxin
AAA_24
Zn_ribbon_Thio2
AAA_29
AAA_5
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UOE83641
LinkDB
All DBs
Position
1:2577592..2578974
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AA seq
460 aa
AA seq
DB search
MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRLAASPQVARNERLSGGYAGGATE
SSVQTLSEINLQEVPRFSSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCQLS
SQLPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEKEQPKIMVIDSIQ
VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFLVGHVTKDGTLAGPKVLEHIIDCS
VLLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSV
MVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFV
NVVGGVKVTETSADLALVIALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAF
KHGFKRAIVPAANMPKGGIPGMQIHGVKKLSEAINAFDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcaaaacgagcttatgtgtgtaatgactgtggtgctgactttccacgttgg
caggggcagtgcaatgcatgtggtgcttggaacacgattaccgaagttaggttagctgct
tcacctcaagttgcgcgtaatgaacgactcagtggtggttacgcaggtggggcaacagaa
tcgagcgttcagacattatcggaaattaacctgcaagaagtccctcgctttagcagtggt
ttcaaagaactcgaccgcgtgctcggtggtggtgtcgtacctggcgctgcaattctgatt
ggtggtaaccctggtgccggtaaatcaacgctgttattgcagaccatgtgtcagctctct
tctcagttgccaacactttatgtcactggtgaagaatcactgcaacaagtcgcgatgcgt
gcctctcgactcggtttaccgaaagaacatctcaaaatgctctctgaaaccaatgttgat
aagatctgtcaggttgccgaaaaagagcaacctaagatcatggttatcgactcaatccaa
gttatgcatgtcgctgatgttcaatcatcgccagggagtgttgctcaagttcgtgagtca
gcaaccgcattaacgcgctatgcgaaacagaacaacgttgcggtgttcttggtgggacac
gtaactaaagacggcacattagcggggccaaaagtactggaacacattattgactgttcc
gtgctgttagatggcggaaccgatagccgctttagaacgctgcgcagtcacaagaaccgt
tttggtgcggtcaatgagttgggtgtgtttgcaatgacaggccaaggcctaaaagaagtc
agcaacccatcggctattttcttgtctcgcggtgaagaagaaacctcgggcagttcggtc
atggttgtgtgggaagggacacgtccacttcttgttgaaatccaagcgctggtggactat
tcccagctcgctaacccgcgtcgtgttgctgttggtttagagcaaaacaggctttcactg
ttattagccgtgctgcataaacatggtggcttacaaatggctgaccaagatgtgtttgtg
aatgtcgtcggtggtgttaaagtaaccgaaaccagtgccgatcttgcattagtgatcgct
ttactttcgagtttcagagaccgtgcattgccaaaagatgtggtggtatttggggaagta
ggcctcgcgggtgagattcgacctgtaccgagcgggcaagagcgcttaaatgaggcattt
aaacatggctttaagagagcgattgttccggcggccaacatgccaaaagggggtattcca
ggaatgcagatccacggtgtgaaaaaattatcagaagcaattaatgcttttgatgagttg
taa
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