Vibrio splendidus: LTQ54_12580
Help
Entry
LTQ54_12580 CDS
T08240
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vsl03029
]
LTQ54_12580 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_12580 (bamA)
Mitochondrial biogenesis [BR:
vsl03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
LTQ54_12580 (bamA)
Transporters [BR:
vsl02000
]
Other transporters
Pores ion channels [TC:
1
]
LTQ54_12580 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
YqfD
Motif
Other DBs
NCBI-ProteinID:
UOE83776
LinkDB
All DBs
Position
1:2729856..2732261
Genome browser
AA seq
801 aa
AA seq
DB search
MAIKQILFASLLATSVAANGAQNFVVQDIKIEGLQRVALGAALLKMPVRIGDEVDEGDVS
EIIRALYASGNFEDVKVLRDEGVLVVQVKERPTIASISFSGNKAIKEEQLQQNLDASGVR
EGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRSDLKFVFTEGVSAKIQQI
NFIGNEVFSDAELLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALKSYYLDRGYLKFKV
DSTQVAISPDKKGVYITLGIDEGEAYTVKDVAFRGELIGREADFEALVPFEDGDTYNGSS
VTSLEEGVKRILGESGYAYPQVRTIPEFDDETKEVSLVINVEAGSRIYVRDIRFTGNNST
KDEVLRREMRQMEGSWLNSKSIDTGKSRLNRLGFFETVDVQTVRVPGSEDQVDLVYNVKE
ANSGSINFGVGYGTESGVSFQVGLQQDNFAGSGNRVGVSAMMNDYQKNVSLDYRDPYWNL
DGVSLGGKIFYNEFEASEAGIVDYTNQSYGTSLTWGFPMDELNRIEFGVGYTHNKIGNVP
TYIQVEQFARSINQYGDENILTDDFDINISWTRNNLNRGFFPTEGNHQRAFAKMTVPGSD
AKYFKAQYDVKHYIPLTKKHEFTLLMRGRLGYGNGYGQTDGNDNLFPFYENYYAGGFTTL
RGFGSNSAGPKAVYGSSTGNNPTYSSATDDSVGGNAVALASLELIVPTPFASDEARSQIR
TSVFFDMASVWDTEFVDRNRPTSGGQYYYDYSDPTNYRSSYGAALQWMSPMGPLVFSLAK
PVKIYEGDDEEFFTFTIGRTF
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcgattaagcaaattctgttcgcaagtctattggccactagtgtggctgcgaacgga
gcacaaaactttgtagttcaagatatcaagatcgaaggtttacagcgtgttgcacttggt
gcagctctactgaaaatgccagtgcgtattggcgatgaagtggatgaaggcgatgtatct
gagatcattcgtgcactgtatgcttcaggtaactttgaggatgttaaggtccttcgcgat
gaaggtgttttagttgttcaagtaaaagaacgaccgaccatcgcaagcatttcattttca
gggaacaaagcgatcaaagaagagcaacttcagcagaacctagatgcatctggtgttcgt
gaaggtgaagcccttgaccgcacaacgctgagtaacatcgagaaaggccttgaagatttt
tactacagtgttggtaagtacaacgcgacagtaaaagcggttgtgacacctttgccacgt
aaccgttctgaccttaagtttgtatttactgaaggcgtatccgctaagattcagcaaatc
aactttattggtaatgaagtcttctctgatgctgagctactgagccgtttcaacctgaat
gttgatgttgcatggtggaatttccttgcggatgaaaaataccagaagcaagtattagcg
ggtgatatcgaagcgttgaaatcgtactaccttgaccgtggttaccttaaatttaaggtg
gattctacacaagtagcgatctctccagataagaaaggcgtttacatcacgcttggtatt
gatgaaggcgaagcctacaccgttaaagatgtcgcgtttcgcggtgagctgattggtcgt
gaggctgattttgaagcattagtaccatttgaagacggcgatacgtacaacggctcttct
gtgacatcactagaagaaggcgtaaagcgtattcttggtgagtctggttatgcgtaccca
caagtacgtactattcctgaatttgacgatgagaccaaagaagtatcattggtgattaat
gtagaagcgggcagccgtatctacgttcgtgatattcgatttacgggtaataactcgacc
aaagatgaagtactacgtcgtgaaatgcgtcaaatggaaggcagctggcttaactctaag
tcaattgataccggtaagagccgccttaaccgtttaggtttctttgaaacggttgatgta
caaacagtgcgtgttcctggcagtgaagaccaagttgacttggtttacaacgttaaggaa
gcgaactcaggcagtatcaactttggtgttggttacggtaccgaatcaggtgtcagcttc
caagttggtttgcaacaagataactttgcgggttcaggtaaccgtgttggcgtaagtgcc
atgatgaacgattaccaaaagaacgtgagcttagactaccgtgacccatactggaacctt
gatggtgtgagcttaggcggtaagatcttctacaacgaattcgaagcctctgaagcgggt
attgtcgactataccaaccaaagttacggtaccagcctgacatggggcttccctatggat
gagctgaaccgtatcgaatttggtgttggctatacgcacaacaagatcggtaacgttccg
acttatatccaagtggaacagttcgcgagaagtattaaccaatatggtgacgaaaacatc
ttaaccgatgacttcgatatcaatatctcttggactcgtaacaaccttaaccgtggtttc
ttcccaaccgagggtaaccaccaacgtgctttcgctaaaatgactgtaccaggctctgac
gctaagtacttcaaagctcagtacgatgtaaaacattacatcccgctgaccaaaaagcat
gagttcacacttttgatgcgtggccgattaggctatggtaatggttacggtcaaacggat
ggtaatgataacttgttcccattctacgagaactactacgcaggtggctttacaacgttg
cgtggctttggctctaactcagcgggtccaaaagccgtttacgggagcagtacgggtaac
aaccctacgtacagctctgcaaccgatgattcggttggtggtaacgcggttgccttggca
agtttagagttaattgtacctacgccgtttgcttctgatgaagcacgcagccaaattcga
accagtgtcttcttcgacatggcaagtgtttgggatacggaatttgtagatcgtaataga
cctactagcggtggtcagtactactacgactattctgatccaacaaattaccgttcatct
tatggtgcagcccttcaatggatgtcgccgatgggcccattggttttctctctagcgaaa
cccgttaaaatttacgaaggtgatgatgaggaattcttcacatttaccattggtagaact
ttctaa
DBGET
integrated database retrieval system
