Vibrio splendidus: LTQ54_12670
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Entry
LTQ54_12670 CDS
T08240
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03030
DNA replication
vsl03430
Mismatch repair
vsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LTQ54_12670 (dnaQ)
03430 Mismatch repair
LTQ54_12670 (dnaQ)
03440 Homologous recombination
LTQ54_12670 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsl03032
]
LTQ54_12670 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_12670 (dnaQ)
Enzymes [BR:
vsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LTQ54_12670 (dnaQ)
DNA replication proteins [BR:
vsl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LTQ54_12670 (dnaQ)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LTQ54_12670 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UOE83793
LinkDB
All DBs
Position
1:2749614..2750381
Genome browser
AA seq
255 aa
AA seq
DB search
MNTSSTPEQNTNEKNSSDENKRIIVLDTETTGMNTEGGPHYMGHRIVEIGAVEIINRRLT
GRHFHVYIKPDRAIQEEAIGVHGITDEFLIDKPEYQDIHKEFLDFIKGAELVAHNAPFDT
GFMDYEFEKLNPAIGKTDDYCKVTDTLAMAKKIFPGKRNNLDILCDRYGIDNSHRTLHGA
LLDAEILADVYLLMTGGQTSLQFNAGQKEGEGESIRRAESGRKSLKVLRATADEVEAHQS
RLDLVEKSGSCLWRQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtagcactccagaacaaaacacgaacgaaaaaaacagttcggacgaaaat
aagcgcatcattgtactcgataccgaaaccaccggtatgaatacagaaggtggccctcac
tatatggggcatcgcatcgttgaaattggtgcggtagagatcatcaaccgtaggctgacc
gggcgtcacttccacgtctatataaagcccgatcgtgcgattcaagaagaggcgattggc
gttcacggtattaccgatgaattcttgattgataagccagaataccaagacatacataaa
gagtttctcgactttatcaaaggtgctgagctggtagctcataacgcgcccttcgatacg
ggctttatggactatgagtttgagaagctcaacccagcgataggtaaaacggatgactac
tgtaaagttaccgataccttggccatggcgaagaagatatttccaggcaaaagaaacaac
ctagatatcttatgtgatcgttatggtattgataactcgcaccgtaccctccatggcgca
ttgctcgatgcggagatcctagccgacgtctatttattgatgacgggtgggcaaacttcg
ctgcaatttaacgccggccaaaaggaaggtgaaggtgaaagtatacgaagagcagaaagt
ggtcgaaaatccctaaaggttttacgagctacggccgatgaagtagaagcgcatcaaagt
cgtttagacctcgtcgagaaaagcggaagctgcctctggcgtcagtag
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