Vibrio splendidus: LTQ54_13185
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Entry
LTQ54_13185 CDS
T08240
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vsl
Vibrio splendidus
Pathway
vsl00061
Fatty acid biosynthesis
vsl00071
Fatty acid degradation
vsl01100
Metabolic pathways
vsl01212
Fatty acid metabolism
vsl02024
Quorum sensing
vsl04146
Peroxisome
Module
vsl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LTQ54_13185 (fadD)
00071 Fatty acid degradation
LTQ54_13185 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LTQ54_13185 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTQ54_13185 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vsl01004
]
LTQ54_13185 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsl04147
]
LTQ54_13185 (fadD)
Enzymes [BR:
vsl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LTQ54_13185 (fadD)
Lipid biosynthesis proteins [BR:
vsl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LTQ54_13185 (fadD)
Exosome [BR:
vsl04147
]
Exosomal proteins
Exosomal proteins of breast milk
LTQ54_13185 (fadD)
Exosomal proteins of breast cancer cells
LTQ54_13185 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
UOE83893
LinkDB
All DBs
Position
1:2855764..2857458
Genome browser
AA seq
564 aa
AA seq
DB search
MDKPWLSRYPSDVPETINPDQYPSLIEMFEQSVQKYADQPAFENMGSIMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPIALFGVLRAGMIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFASTLEKVVDKTPVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISFRKALHKGRRLQYVKPFMAGDDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYSPVLQEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFIKELQKVPF
TAITGVNTLFNALVNNEDFHELDFSNMRLSVGGGMAVQRAVAEQWKKATGVHLLEGYGLT
ECAPLVTGNPYDLKDYTGAIGLPVPSTEVRIVDDEGKVVGNDQVGELQVRGPQVMQGYWQ
RPEATKEVIDQDGWLSTGDIVKFDDEGLLYIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQPHEVSGELVKIYVVKRDPSLTKEDIIAHCREHLTGYKIPKLIEFREELPKT
NVGKILRRVLREENDAELAKRASE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaaccttggctttcacgttatccaagtgacgtaccagagacgatcaacccagat
cagtacccatctcttattgaaatgttcgaacagtcggtacagaagtacgcagaccaacca
gcattcgagaacatggggtctatcatgacattccgtaagcttgaagagcgcagtcgtgct
tttgctgcttacttgcagaatgatctaaaactgaagaaaggcgatcgtgtcgcgcttatg
atgccaaacttgttgcaatacccaattgcactctttggtgtactgcgtgcaggtatgatt
gcagtgaacgtcaacccactgtacacgcctcgtgaacttgaacatcaattgaatgactct
ggcgcaaaggcgattgttatcgtttctaactttgcgagcacgctagaaaaagtcgttgat
aaaacaccggttaaacacgttgtactaactagccttgggcaaatgctgccacgagcgaaa
ggtacgattgtcgacttcgtagtgaaatacgtaaaaggcatggtgcctaagtacgatctg
ccgggtgctatctcatttcgaaaagcactgcataaaggccgtcgcctacagtacgtgaag
ccatttatggctggcgatgacatcgcattcctacagtacacaggtggtacaacgggcgta
gcgaagggcgcaatcctaacgcaccgcaacatgattgcgaacgtacttcaagcgaaaggg
gcatatagccctgttctgcaagaaggccgtgaattagtcgtaacggcattgccgctttac
cacgtgttcgcactgactgtgaactgcttactgtttgttgagatgggtggtcgtaacctt
ctgattactaaccctcgtgacattcctggctttattaaagagctgcaaaaggttccgttt
accgcgattactggcgtaaacaccttgttcaatgcgctagtcaataacgaagatttccac
gagttggattttagtaatatgcgtttatctgttggcggtggcatggcggttcaacgcgct
gttgctgagcaatggaagaaagcgacaggtgtccacctacttgaaggctatggtttaacc
gagtgtgctcctctggtaacgggtaatccatacgatctgaaagactacacaggtgcaatc
ggcctaccagtaccatcaacagaagttcgtattgttgatgatgaaggtaaagtggttggc
aatgaccaagtgggtgaattgcaggttcgtggtcctcaagtgatgcaaggctactggcag
cgtccagaagcgaccaaagaagtgattgaccaagatggttggttatcgacgggtgatatc
gttaagtttgatgacgaaggcttgttgtacatcgtagaccgtaagaaagacatgattcta
gtgtcgggcttcaacgtttacccgaacgagattgaagacgtagtggctctgcatggcaaa
gtgttagaagttgcggctatcggccaacctcatgaggtgtctggtgagctggttaagatt
tacgttgtgaaacgtgaccctagcctaaccaaagaagacattatcgcgcactgtcgtgaa
cacctaactggctacaagatccctaaattgattgagttccgtgaagaactaccaaaaacc
aatgtaggcaaaatcttgcgccgagtgcttcgtgaagaaaacgacgcagagcttgccaaa
cgcgcaagcgagtaa
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