Vibrio splendidus: LTQ54_14070
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Entry
LTQ54_14070 CDS
T08240
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LTQ54_14070 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_14070 (xthA)
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LTQ54_14070 (xthA)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LTQ54_14070 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF4367
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
UOE84056
LinkDB
All DBs
Position
1:complement(3063053..3063859)
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AA seq
268 aa
AA seq
DB search
MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK
AHYGVAMLCKQEPTSVQKGFPTDNEDHQKRMIMATFEDENGEKVTVLNGYFPQGDNIKHE
TKYPYKREFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF
QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD
KCTEAGIDYELRGIEKPSDHAPIWSTFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcattagcttcaatatcaatggccttagagcccgccttcaccaactgcaagcg
attatcgacaaacaccaacctgacgtgattggtcttcaagagattaaagtccacgatgaa
gcctttccgctcgctgatgttgaagcgatgggttacaaggtttacttccacggccaaaaa
gcgcactacggtgtggctatgctttgtaagcaagagccaacttcggtacagaaaggcttt
cctacagacaatgaagaccatcaaaagcgcatgatcatggcgacgtttgaagatgaaaat
ggtgagaaggtcactgtgctaaatggttacttccctcaaggcgacaacattaagcatgaa
accaaatacccgtacaagcgtgagttctacaaagacttgatgacgtacctgaacgattac
cacaacaaagatgaacaagtgatcgtaatgggcgacattaatatcagccctaccgatatt
gatatcggtattggtgaacctaatgcgaaacgttggttgaaaacaggtaagtgttctttc
caaccagaagagcgcgaatggttgaaaacactgatggattggggttttgtggacagcttc
cgtttactacaccctgaagtgaacgatcaatactcgtggtttgattaccgctcaaaaggc
ttcgtggacaaccgcggcctgcgcattgatgtggtacttgcgactcaaaagcttgctgac
aaatgtactgaagccggtatcgactacgaactgcgtggcattgaaaaaccatcagaccat
gctccgatttggtcgacgtttaaatag
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