Vibrio splendidus: LTQ54_14255
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Entry
LTQ54_14255 CDS
T08240
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vsl
Vibrio splendidus
Pathway
vsl00630
Glyoxylate and dicarboxylate metabolism
vsl00680
Methane metabolism
vsl01100
Metabolic pathways
vsl01120
Microbial metabolism in diverse environments
vsl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LTQ54_14255 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LTQ54_14255 (fdhF)
Enzymes [BR:
vsl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LTQ54_14255 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Fer2_4
Pyr_redox
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4
Fer4_9
Fer4_6
Fer4_8
Fer4_10
Fer4_16
Thi4
DAO
FAD_oxidored
Fer4_2
NAD_binding_7
HI0933_like
Fer4_18
FAD_binding_2
Fer4_15
Fer4_21
FAD_binding_3
Amino_oxidase
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
UOE84092
LinkDB
All DBs
Position
1:3110439..3114668
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AA seq
1409 aa
AA seq
DB search
MIQIVIDGKYRIVEQGQTVLEAAKTCGLEIPSLCGLNKTADKVPCDLCVVEVDGVGVTRS
CELEVSNGLNITTQSKQLTIHRQDALNRIMTDHYADCEAPCQTACPAGVDIQSYLHHIAQ
NDHIKAIEVIKKTLPMPLSIGRVCPAFCETECRRNLVDESIAIRQLKRHAADADLAAQES
YMPTKKPIKGKSIAIVGSGPGGLTAGYYLSNEGYDVSVYESMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMSVECDKKLGVDFTLSDLSNDFDAVCLAVGASQAVEMNYPGSDLGG
CYLGVDYLKDYVTDQQYVTGKKVAVIGGGNTAIDCARTAVRDGADTTLIYRRTRDEMPAE
DYEIEEAEHEGVKFHFLTNPAENIADENGHVSEIRLERMALGPADASGRRSPKPTGEFFV
EAFDTVIAAVSQKPDLSFMDNEAIDIPLTRWNTADADPQTMHTGTVNIFSIGDFRRGPAT
AVEAVGDGRIAAQAIDRFFHGDMDNIPAKPFNSRKHKQLKAVDPEQYKSIQRMARKIMPE
LTPEQREQSFDEVETGFDNADAIAEAARCLECGCQANTDCDLRDYSTEYKATQTHPEYKI
DVASNESWQAIRAEEAKVGLTRQKFVVDDSSEFIIFDANRCISCGQCIQACREQNVHGVL
SFMNQSDGKPASRPECRPNFGAEKTLMGDSNCVQCGSCIQVCPTGAMVDARDRKQGDTGL
LKKVDTICTYCGVGCKLTMHIDEQKNKIRYIEGGDSPVNEGMLCVKGRFGFDFVGSDARL
TTPLIRKDGWLQPASWEEAIKLIADKFTAIKQGFGNNALAGFSSAKTTNEDNYAFQKFIR
RELGTNNVDHCARLCHASTVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTSAHPIIG
SHIKQAVRHGGARLIVADPKRIDIADHAELYLAHRPGTDVMLINGVMQQIIKHGWYDQNY
IDDRVDGFDTLLQEVMSPSYSLDKVELVTGVKAEDIFAMARLIGTAERTAVYYSMGITQH
TTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNNLPGYQKVYNPIV
RQKFAMEWGVSDLPAEAGLTLTEIIDGACHRDVRGLYVMGENPVLSDPNQAHVIEGLEAL
DFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRINPAVNPPSDAKEDWVII
QMLANAMGGGWDYKTVADITNEIARVTPQYGGLRWENITMNGVQWPTNKNNPDGTRIMHQ
TQFTRGRGQMEAIPFRYAAELPDAEYPLVLTTGRILEQFHTGTMTRKTKGLDNLAGPRAM
VSVHDAEALGISNGQMLKVSTRRGEIEIAAFVTKRMQKGVVFIPFHFVESPVNRLTTTAT
DPHAKIPEFKVAAVRIDPIRESEAETTEA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaatcgttattgatgggaaatatcgaattgtcgagcaaggacaaaccgttctt
gaggcggcaaaaacatgtggtttagagatcccatctttatgtggtttgaacaaaacagcg
gataaagtaccgtgtgacttgtgtgttgttgaagttgatggcgttggtgtcactcgttct
tgtgagcttgaagtgtctaatggattgaatattaccacccagtcaaaacagttaacgatt
catcggcaagacgcgttgaaccgcatcatgaccgatcattacgccgattgtgaagcgcca
tgccaaacagcgtgtcctgctggggtcgatatccaatcttatctgcatcatattgctcaa
aatgatcacatcaaagcgatagaggtcatcaaaaaaacactaccaatgcccctttcgatt
ggtcgagtatgtcctgctttctgtgaaacggaatgtcgtcgcaacttggtcgatgaatcc
atcgcgattcgccaactcaaacgacacgctgccgacgcagatttagccgctcaagagagc
tacatgccaactaagaaaccaattaaaggcaagagtattgcgattgtcggaagtggtcct
ggtggtcttacggcgggttattacttatctaacgaaggctatgatgtcagtgtctatgag
tcgatgcccaaagcgggaggttggttgcgttacggtatccctgaatatcgcttacctaag
tcgattctagataaagaaatcgaactgatgtgtcgtaacgggatgtcggtagagtgtgat
aaaaaactcggtgttgattttacactgtctgatttgagtaacgattttgatgcggtttgc
ttagccgttggtgcatcgcaagcagttgaaatgaattatccgggcagcgatcttggcggt
tgttatctaggcgtcgattacttgaaagattatgtgaccgaccagcagtatgtcactggt
aaaaaggttgcagtgatcggtggcggcaataccgcgattgactgcgctcgaaccgcggtg
cgtgatggtgctgataccacgcttatctaccgtcgtactcgagatgagatgcctgcagaa
gattatgaaatcgaagaagctgagcatgaaggtgtgaagttccacttcttaaccaacccg
gcagaaaatatagccgatgaaaatggtcatgtatcagaaatacgattagagcgtatggct
ttgggaccagcagatgcctctggtcgtcgcagtcctaaaccaacgggcgagttctttgtt
gaagcgtttgatacggttattgctgccgtgtcgcaaaagccggatctgagctttatggac
aatgaagcgattgatattcctcttactcgttggaataccgctgatgccgatccgcaaacc
atgcatacaggtaccgtcaatatctttagtatcggtgatttccgacgcggccctgcaacc
gcagtggaagcggtaggggatgggcgcattgctgcacaggcgattgatcggttctttcat
ggcgacatggataacattccggccaaaccgtttaattcaagaaagcacaagcagctcaaa
gcggtggatcctgagcaatacaaatccatacagcgtatggcgcgtaagatcatgccagag
ctaacacccgagcagcgtgaacaaagcttcgacgaagtagaaacaggatttgataatgcc
gatgccattgcggaagcagcaagatgtctagaatgtggctgccaggccaatactgattgc
gacctacgagactactcgaccgaatacaaggcaacgcaaacacatccagagtacaaaatc
gatgtggcttcgaatgagagttggcaagcgattcgtgcagaagaagcgaaggtcggttta
acaagacaaaaatttgtagttgatgacagttcagaatttattatctttgatgccaaccgc
tgtatcagttgcgggcagtgtatccaagcgtgtcgtgaacagaatgtccatggcgttcta
agcttcatgaatcaatctgatggcaagcctgcatcaagacctgaatgtcgtcctaatttt
ggggcagaaaagaccttaatgggtgactcaaactgcgttcaatgtggatcgtgtattcag
gtatgtccaactggtgcaatggtggatgctcgtgatagaaagcagggagacacaggccta
ctcaagaaagtcgataccatctgcacctattgtggtgtgggctgtaagctaaccatgcat
atcgatgagcagaaaaacaaaatccgttatatcgaaggcggtgactctccggttaatgaa
ggcatgttgtgtgttaaggggcgattcggtttcgattttgtgggcagtgatgcgcgttta
accacaccattaattcgtaaagatggctggttgcaacctgcaagttgggaagaagcgatt
aaactcattgctgataaatttaccgcgattaaacagggctttggtaacaatgctttggcg
ggcttctcgtcggcgaaaaccaccaatgaagacaactatgccttccaaaaattcatacgt
cgcgaactaggtaccaataacgtcgatcactgtgcacgtctttgtcatgcttctactgtt
accggtttagaggcttcgctgggtagcggtgcaatgaccaatgatattccaagtatcaag
cactcagatgtgatctttattatcggttcagacacgacttcagcacacccaattattggc
tcgcacatcaagcaagcggtgaggcatggtggagcacgattgatcgttgctgatccaaaa
cgaatcgatattgctgaccacgctgagctttacttagcgcaccgaccgggcaccgatgtg
atgctgattaatggtgtgatgcagcagatcatcaaacacggttggtacgatcaaaattat
attgatgatcgtgttgacggctttgataccttattgcaagaagtcatgtcaccaagctac
tcacttgataaagtcgaattggtgactggcgtgaaagcggaagatatcttcgcgatggct
cgcttgattggtactgcagagcgcaccgcagtgtattattcgatgggtattacgcaacac
actactggtcacgacaacgtacgttcaatcgctaatctacaactattgtgtggcaacatt
ggtatcgaaggcggtggtatcaacccattacgtggccaatccaatgttcagggcgcgtgt
gatatgggtgcattgccgaacaaccttccaggttatcagaaagtgtataacccgatagtt
cgtcaaaaattcgcgatggagtggggtgtttctgacttaccagcggaagcggggttaacg
ctcaccgaaattattgatggagcgtgccatcgagatgttcgtggtctgtatgtcatgggt
gagaacccagtgttgagtgacccgaatcaagcgcatgtgattgaaggccttgaagcgtta
gatttcctagtggttcaagatattttcttaaccgaaaccgctcagtatgccgatgtggtt
ctgccgtcttgttcgtttgctgaaaagtctggccacttcaccaatacagagcgacgagtc
caacgtattaatcctgctgttaatccgcccagtgacgcgaaagaagattgggtgatcatt
caaatgctagccaatgcaatgggcggcggttgggactacaaaaccgttgctgatatcacc
aatgagatagcacgtgtaacgccgcagtatggtggtttacgttgggagaatattacgatg
aacggcgtccaatggccaactaataagaacaaccctgatggcacacgtatcatgcaccag
actcaattcactcgcggacgtggtcaaatggaagcgattccgtttagatacgcagcagaa
cttcctgatgcggaatacccgctagtattaacgacaggtcgcatcctagaacagttccac
accgggaccatgacacgtaaaaccaaagggcttgataacttggctggaccacgtgcgatg
gtgagtgttcatgatgccgaagcgttagggatctcgaatggccagatgctcaaagtatca
acccgtcgtggagaaattgaaatcgcggcatttgtgactaagcgaatgcaaaagggggtg
gtatttattccattccattttgtcgaatctccagttaaccgcttaactacgactgcaacc
gatccgcacgctaagatcccagagtttaaagtggcggcagtccgcattgatcccattcgt
gagtctgaagcagaaacaacagaagcttag
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integrated database retrieval system
