Vibrio splendidus: LTQ54_16425
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Entry
LTQ54_16425 CDS
T08240
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
vsl
Vibrio splendidus
Pathway
vsl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LTQ54_16425 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_16425 (choW)
Transporters [BR:
vsl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LTQ54_16425 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UOE86811
LinkDB
All DBs
Position
2:complement(58215..59057)
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AA seq
280 aa
AA seq
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MNFITENKIPVGQWMEAGVDWLTINAAGFFDAISIFLETVIMFLVDVFKWMPPALPIVMT
AAIAWYLHRKPSLVIFVVAALLTILNLGYWQEMLETFVLVFAATTISVLIGVPVGIMAAH
RPWLYTVLRPILDLMQTVPTFVYLIPTLVLFGLGIVPGLISTIIFAIAAPIRLTYLGVTK
VPEELIEAGKAFGASRMKLLMKVELPAALPSIMAGVTQCIMLSLSMVVIAALVGADGLGK
PVVRALNTVNISQGFEAGLAIVLVAIILDRLCKTPNQKEA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttattacggaaaacaaaatccctgtcggacaatggatggaagcgggtgttgat
tggctaacaatcaatgcagcaggattctttgacgctatttcgatttttctagaaaccgtc
attatgtttttagtcgatgtatttaagtggatgccgcctgcactgccaatcgtgatgact
gctgcgattgcatggtacttacaccgtaaaccttcgctagtgatctttgtggtcgcggca
ctgctgactattcttaacctcggctactggcaagaaatgctggaaacctttgttctcgtc
tttgcggcgacaacgatttccgtattaattggcgtaccggttggcatcatggcagcgcat
cgtccttggctttataccgttttgcgtccaatccttgatttgatgcagacagtcccaact
ttcgtttatctgattccaactctggttctattcggcttgggtattgttcctggcttaatc
tctaccattattttcgcgatagctgcaccgattcgtttaacctacttaggtgtcactaaa
gtgcctgaagagttgattgaagcgggtaaagcgtttggtgccagccgcatgaaattgctg
atgaaggtcgaattaccggcggctttaccaagcatcatggcgggtgtaacccaatgtatt
atgttgtcgctttcgatggtggttatcgccgctcttgtcggtgctgacggacttggtaaa
cctgttgttcgtgcattgaacacagtgaacatctcacaaggttttgaagctggattagcg
attgtattagtcgcaatcatccttgaccgcttgtgcaaaacaccaaaccagaaggaagct
taa
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