KEGG   Vibrio splendidus: LTQ54_16535
Entry
LTQ54_16535       CDS       T08240                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vsl  Vibrio splendidus
Pathway
vsl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vsl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LTQ54_16535
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vsl02022]
    LTQ54_16535
Two-component system [BR:vsl02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LTQ54_16535
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_16 AAA BrxC_BrxD GFO_IDH_MocA
Other DBs
NCBI-ProteinID: UOE86833
LinkDB
Position
2:complement(87416..88756)
AA seq 446 aa
MQRIALIEDDAIVRQATSQWLQLAGFDVTAFEVGQDALNAVEQGDFQTIISDVRLPDIDG
VELLGRFKHLVPDVPVILITGHGDVDMAVKALQQGAYDFIEKPFDPERLSQTVSEAVDKH
QSGQDRNSRQNYLDNLKGIEQVLIGRSKVMCELREQIQKVASIDTNVIIYGETGCGKELV
ASCLHEFSLRKTHPFVPLNCGAIPENLFESELFGHEAGAFTGAAKRRIGKLEFADKGTVF
LDEIESMPLSMQVKVLRTLQDNVVERVGGNQQQHVDLRVVSASKSDLLNHPDFRQDLFYR
LNVAQLHLPPLNEREDDALILFEHFTQEANNETRVASEADRYALLSYAWPGNVRELRNVA
IRFALDESLTVGDILACRPNSVTESTTAGIPLAVQVQSFERKVIHDALVRYQGRINDVMQ
DLDLPRRTLNQKMVRYALNRSDYVDS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgcagcgtatagctttgattgaagatgatgcaattgtgcgtcaagcaaccagccagtgg
ttacaattagcgggcttcgatgtaaccgcatttgaggttgggcaagatgcgttaaacgcg
gtagagcagggtgacttccaaaccatcattagtgatgtgcgtttaccagatattgatggt
gtggaactgttaggacgctttaaacatcttgtgccagacgtgcctgtcatcttgatcacg
ggtcatggtgatgtcgatatggcggtgaaagcattacagcaaggcgcgtatgatttcatt
gaaaagccattcgacccagaacgtttgtctcaaacggtatcggaagcggtcgacaaacat
caaagtggccaagacagaaacagtcgtcagaactatctggataatctgaaaggcattgaa
caggtgctgattggtcgcagtaaagtgatgtgtgaattgcgagagcagatacaaaaagtc
gcctcgattgataccaatgtgatcatttatggtgaaaccggctgcggtaaagagctagtc
gcttcttgtttacatgagtttagcctgcgtaaaacccatccgtttgtaccgctaaactgt
ggcgcgattccagaaaatctctttgaaagcgaactgtttggacacgaagcaggtgcgttt
actggtgccgccaagcgacgtattggtaagcttgaatttgccgacaaaggcacggtgttt
ctcgatgaaatagagagcatgccactgtcgatgcaggtcaaagtgctgcgtaccttgcaa
gataatgtcgtcgaacgcgtagggggtaatcagcaacaacatgttgatctacgagtggtc
tctgcctcgaaaagcgatctactgaatcaccccgattttcgccaagaccttttctatcgc
ttgaacgttgcccaactacatttacctccccttaatgaacgagaagacgatgctttgatc
ctttttgaacacttcactcaagaagcgaacaatgaaacccgagttgccagtgaggccgat
cgttatgcgttgttgtcgtatgcatggccgggcaatgtgcgtgaactgcgcaatgtcgcg
attcgttttgcactggatgaaagcctgacagttggcgatatcttggcgtgtcgccccaat
tctgtcacagagtctacaacggcaggcatcccgttggcggttcaagtgcagagctttgaa
cggaaagtgattcatgatgcgctagtgcgttatcaagggcgcatcaatgatgtgatgcaa
gatttggatttaccccgtcgaacattgaaccaaaagatggtgcgttatgcgttgaaccga
agcgattatgtcgattcgtaa

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