Vibrio splendidus: LTQ54_16645
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Entry
LTQ54_16645 CDS
T08240
Name
(GenBank) Lrp/AsnC ligand binding domain-containing protein
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsl03000
]
LTQ54_16645
03036 Chromosome and associated proteins [BR:
vsl03036
]
LTQ54_16645
Transcription factors [BR:
vsl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
LTQ54_16645
Chromosome and associated proteins [BR:
vsl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LTQ54_16645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
DDRGK
E3_UFM1_ligase
MarR_2
HTH_34
LexA_DNA_bind
TrmB
HTH_5
HTH_27
HTH_Crp_2
NirdL-like_HTH
Fe_dep_repress
DUF7343
GntR
HTH_IclR
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UOE86855
LinkDB
All DBs
Position
2:complement(115156..115644)
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AA seq
162 aa
AA seq
DB search
MSQHQLDRIDKEILRILHMKGRLPVVELAKQVNLTTSPCSDRLKRLEKEGYITGYHAELC
SEKLGLDVQVFIHIRLDQTSFSIFDKFAQAVEMMPEVEECYSLSGDFDTMIKVRVKDMKA
YQAFMATKLGTLPGVIQTRSEVVIEEHKKGFGVNPELLATLK
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcatcaactcgatcgtatcgataaagagatactaagaattctgcatatgaaa
gggcgtttgcctgttgttgagttggcaaagcaggtcaacctaacgacgtccccttgttct
gatagattgaagcgattggagaaagaaggctacataacgggctaccatgccgagctttgt
tcagaaaagctgggactcgatgtccaggtctttatccatattcgtctcgaccagaccagc
ttttcgattttcgataaattcgcccaagcggttgaaatgatgcctgaggtggaagagtgt
tattcgctgtcgggtgattttgacaccatgatcaaggttcgagtgaaagacatgaaggca
taccaagcgtttatggcaaccaagctgggcacactgccgggcgtgattcagactcgcagc
gaagtggtgattgaagagcacaagaaaggctttggtgttaaccctgagttgttggccacc
ctaaaatag
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