Vibrio splendidus: LTQ54_16735
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Entry
LTQ54_16735 CDS
T08240
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vsl
Vibrio splendidus
Pathway
vsl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LTQ54_16735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_16735
02044 Secretion system [BR:
vsl02044
]
LTQ54_16735
Transporters [BR:
vsl02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LTQ54_16735
Secretion system [BR:
vsl02044
]
Type I secretion system
Adhesin protein transporter
LTQ54_16735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
Zeta_toxin
Peptidase_C39
AAA_29
TsaE
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
UOE86870
LinkDB
All DBs
Position
2:138646..140760
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AA seq
704 aa
AA seq
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MQDPLLNSLIYVSRYYGLANSPEALINGLPLSDGKLTPFLFPRSAERAGLVAKENRSELE
SIPHLILPAILLLKQGEACVLNSIDLEKQEAEIITAESGMVPIVIPVDELKEQFIGRYFL
VKKQFRYDERSPEVLKTRKGHWFWSTIWESKNIYRDVLIASILINIFAIAAPMFTRLVYD
KVVPNLAFETLWVLASGIFVVFLFDLLLKLMRSYFIDVAGKKSDILISSKLFSKVLGIRM
EAKPASVGAFAKNLQEFESIREFFTSATIGSLIDLPFALMFLALIWLMAGNLVFVPVVGV
VILIIYALLIQGPLRRTIEEGSRLASQKYANLIESLAGLETVKLFSAQSQFQFRWEEAVA
HMANWNIKSRRITDSIQNTAGFVQQSTNVGMIIFGVYLIAEGELTMGGLIAATMLSGRAI
GPLVQLSLLSTRYNQAKSSMTLIEQVMSMPDEQEEGKRYIHRPIIQGHIALDKVTFHYPD
SPVASIRDLTLNIKPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDMEQLHHV
DVRRNIGCVPQDSNLFYGSVRDNITLGRPLVDDRDVMDAANRAGVTAFTQQDPAGLERQV
GEGGALLSGGQRQSIAIARAFLGRPPVLLMDEPTSAMDNRSEMHIKHQLNQLLPSETLIL
ITHKTSMLDIVDRVIVMERGSIIADGPKAQVLSDLKQGKVRAAS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatccactattaaactcactgatctacgttagtcggtattacgggttagctaac
tcgcccgaagcgttgatcaatgggctaccactatccgacggaaagctaacccctttccta
ttccctcgttctgctgaacgagcggggttagtggcgaaagaaaaccgttccgagttagaa
agtattcctcacctgattctgcctgctattttacttctcaaacagggcgaagcatgtgtt
ctaaatagtatcgatttagaaaaacaagaagcggagatcatcaccgcagaaagcgggatg
gtgcctatcgtcattccagtcgatgaactcaaagaacaattcatcggccgctacttcttg
gtaaaaaagcaattccgttatgatgaacgttcaccagaggttctaaaaacacgcaaaggt
cactggttttggagcaccatttgggaatctaaaaacatctatcgtgatgtgttgattgca
tccattctgatcaatatcttcgccattgccgcgccaatgtttactcgtttggtgtacgac
aaagtagtccccaacctcgcctttgaaaccctgtgggtgttggcgagtggtattttcgtc
gtcttccttttcgatctgcttctcaagttaatgcgcagttacttcattgatgtcgcgggg
aaaaaatccgatatcttaatttcctctaaactgttcagtaaagttctggggattcgcatg
gaagcaaagcccgcctctgttggcgctttcgcgaaaaacctgcaagaatttgaatcaatc
cgtgagttctttacctcagcaaccattggctcgttaatcgacttaccattcgcgctgatg
ttcttggcgttaatttggctgatggccggaaaccttgtgtttgttcctgtcgtcggtgtg
gtcattttgattatctatgcactgttaatccaagggccactgcgtcgtacgattgaagaa
ggctctcgacttgcttctcagaagtacgcgaacttaattgagagcttggctgggttagaa
accgttaagctattcagcgcgcaaagtcagttccaattccgttgggaagaagcggttgcg
cacatggcaaactggaatatcaaaagtcgccgcatcaccgacagcatccaaaacacggct
ggctttgttcaacaaagtaccaatgtaggtatgatcatttttggtgtgtacctcatcgca
gaaggtgaactcaccatgggtggcttgattgccgcgaccatgttgagcggccgtgcaatt
ggccctcttgttcaactgtctttgctttctacacgttacaaccaagcaaagtcttcgatg
accttgattgaacaagtaatgtcgatgcctgatgaacaggaagaaggtaagcgctacatc
caccgtccgattattcagggtcatattgcgctagataaagtgacgttccactacccagac
tcgcctgtcgcttctatcagagacctaacccttaatatcaaacccggtgaaaaagtagcg
atcattggccgaattggttcaggcaagaccacgctagaacgtttgattatgggcctatac
aagcctacagaaggtcatgtgcgcattgatgacactgacatggaacaactgcatcatgtc
gacgtacgacgcaatataggctgtgtaccgcaagacagtaacctgttctacggctcagta
agagacaacattaccttaggtcgcccgttggtcgatgaccgtgatgtgatggacgcagcc
aaccgtgcaggcgtgaccgcttttactcagcaagatccagcaggcttagaacgccaagtg
ggcgaaggtggtgctttgctatctggtggtcaacgtcagtcgattgccatagcgagagcc
ttcttaggacgtccacccgtgcttttgatggatgaaccgaccagtgcgatggataatcgc
tcagagatgcacatcaaacatcagctcaaccagttattgccaagcgagacattgattctt
atcacccacaaaacatcgatgttggatattgtagatagagtgattgtgatggagagaggc
agcattattgccgacggcccgaaagcacaagttctgtcagacttgaagcaaggcaaggta
agagcagcaagttaa
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