Vibrio splendidus: LTQ54_16805
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Entry
LTQ54_16805 CDS
T08240
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
vsl
Vibrio splendidus
Pathway
vsl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTQ54_16805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_16805
Transporters [BR:
vsl02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LTQ54_16805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
UOE86884
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All DBs
Position
2:159238..160362
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AA seq
374 aa
AA seq
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MKTLLSRSTVSPRKLMGSPTKLIGTTAKLIGVTGLTATLSMPAMAKDADLESLIEAAQKE
GAVYSVGMPDSWANWKGTWTDLKANYGLKHQDTDMSSAQEISKFEAEKKNATADIGDVGF
AFARVAVKKNVTQPYKPTTWNDIPDWAKDKDGHWALAYTGTISFISNNNLVEDAPKTWSD
LLEGDYKVTVGDVGVAAQANNAILAAAFANGGDESNLKPAIKFFGELAKQGRLSYTDPSI
ANLEKGEVEVAIMWDFNALNYRDKIDRERFTVSIPQDGSVISGYTTIINKYAQNPNAAKL
AREYIFSDQGQINLAEGYARPIRSNITLPQSVQDKLISNDEYSNVHPVTDFSAWEKSARR
LPRQWQESVLIHQQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttgcttagccgttcaactgtatcgccaagaaaattgatgggttcacctaca
aagctaataggcacaaccgctaaattgattggtgtaacaggacttacggcaacactttca
atgccagcgatggcgaaggatgctgatcttgagtcactgattgaagccgctcaaaaagag
ggtgctgtttacagtgtgggtatgccagacagttgggcaaactggaaaggcacatggact
gacctgaaagcaaactacggtttgaagcatcaggataccgatatgagctcggctcaagag
atctcgaaatttgaagcagagaagaaaaacgcaaccgctgatattggtgatgtgggtttc
gcattcgcacgtgtggccgtaaagaaaaacgtcactcagccatacaaaccaaccacttgg
aatgacattccagactgggcaaaagacaaagatggtcactgggctcttgcttacactggc
accatctctttcatttccaacaacaatcttgttgaagatgcgccgaaaacttggagtgac
ttactagaaggtgactacaaagtcacagtcggtgacgtaggcgtagcagcgcaagcaaac
aacgcgattctagcggctgcatttgctaacggtggtgacgagtcaaacctaaaaccggcg
attaaattctttggtgagctagcgaagcaaggccgtctgtcttacaccgacccaagcatc
gcgaatcttgaaaaaggcgaagtggaagtggcaatcatgtgggacttcaacgcactgaac
taccgcgacaagatcgaccgtgagcgctttacagtcagcattccacaagatggctcagtg
atttcaggttacaccaccatcattaacaaatacgcacaaaacccgaacgcggcgaagttg
gctcgtgaatacatcttcagcgaccaaggccaaatcaacctagcagaaggttacgcacgt
ccaatccgcagcaacattacgctacctcaatcagtacaagacaagctgatctcgaacgat
gaatacagcaatgtgcacccagtgactgacttctcagcatgggaaaaatcagcacgtcgc
ctgccacgtcaatggcaagaaagcgtattgattcaccagcagtaa
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