Vibrio splendidus: LTQ54_17160
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Entry
LTQ54_17160 CDS
T08240
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_17160 (phrB)
Enzymes [BR:
vsl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LTQ54_17160 (phrB)
DNA repair and recombination proteins [BR:
vsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LTQ54_17160 (phrB)
Prokaryotic type
LTQ54_17160 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UOE86952
LinkDB
All DBs
Position
2:complement(235460..236905)
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AA seq
481 aa
AA seq
DB search
MSDILWIRRDLRIHDNPALVSAVENGVSIAVFISTPQQWQQHHLAPIKADLIYRHLQQLE
SQLAEFGIDLLHLKARDFDDQAAQLTHLYKQLDATCVYANSEPEVDEQLRDKRLIASGIK
LKITDCDTILPLGSVLNKQGEMFKVFTPFKNAWLKEVQAKGIICSHAPVHSTGSAQAGSS
ETDSLHNPSQLKQSLGGFSGEYDFDFPRTDSERWPLSQDVLESVIPNFLANKVNDYSRLR
DIPSIKGTSGLSPYLAIGAVSPRWLAIQLIQQQPDLLFDTQLPAFSWLNELIWRDFYKHL
MFHHPKLVKGANFQQKYNGLDWYHDNPSFKAWCEGKTGYPLVDAAMRQLVETGWMHNRLR
MVVASFLTKHLLIDWRWGERFFMSHLIDGDFSANNGGWQWASSTGCDAQPYFRIFNPITQ
SEKFDPKGIFIRKYIPELKNIPDKHVHFPHDFIAKNGIDSEYWQPIVEHKEARLRALAFF
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacattctatggataagacgagacctgaggattcacgataacccagcgctcgtc
tctgcagttgaaaacggcgtctctatcgccgtttttatttcaacgccacagcaatggcag
caacaccaccttgcgccaatcaaagccgatttaatctatcgtcacctgcagcaacttgaa
tcccaactcgctgaatttgggatagatcttttgcacctcaaagcccgcgattttgacgac
caagccgcacaactcactcatctatacaaacagcttgatgcgacgtgtgtttacgccaat
tctgagcctgaagtagacgagcagttacgtgacaaacgcttaatcgctagcggtataaaa
ctgaagataaccgactgcgatacgattctgccattaggtagcgtgctgaataaacaaggc
gagatgttcaaggttttcacacctttcaaaaacgcatggttaaaagaagtgcaagcgaaa
ggcatcatttgcagccacgctccagtgcattcaacaggatcagcgcaagcaggttcatct
gaaacggattcgcttcataatccatcacaactgaaacaatcgttaggtggtttttctggc
gagtacgatttcgactttccgcgtaccgattcagagcgttggccactaagccaagacgtc
cttgagagcgtgattcccaatttcttagccaataaagttaatgactattctcgccttaga
gacattccctcgataaaaggcacgtctggactatccccctatttggcgattggcgctgta
agcccacgttggttagcgattcagttgatacagcaacaacccgatttgttgtttgacaca
caactgccagccttttcttggcttaatgaattgatttggcgagatttttataagcatttg
atgtttcatcatcctaaactggttaaaggtgcgaactttcagcagaaatacaacggctta
gattggtatcacgacaaccctagcttcaaggcgtggtgcgaaggaaaaacaggctaccca
ttagttgatgctgcgatgcgtcaattggttgagacaggctggatgcacaacaggctcaga
atggtggtggcaagcttcctaaccaaacacctgctgatcgattggcgttggggtgagcgt
ttctttatgtcgcaccttatcgatggtgatttcagtgcgaataatggcggttggcaatgg
gcttcaagtactggctgtgatgctcaaccttactttcgaattttcaatccgatcacccag
agtgaaaagtttgatccaaaaggaatttttattcgtaagtacataccagagctgaaaaac
atcccagataaacatgttcatttcccacatgactttatcgctaaaaacggaatagacagc
gaatactggcaacccatcgttgagcacaaagaagcacgattgagagccttagccttcttc
aaataa
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