Vibrio splendidus: LTQ54_18950
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Entry
LTQ54_18950 CDS
T08240
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsl03009
]
LTQ54_18950 (dbpA)
Enzymes [BR:
vsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LTQ54_18950 (dbpA)
Ribosome biogenesis [BR:
vsl03009
]
Prokaryotic type
rRNA helicases
LTQ54_18950 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
CMS1
AAA_30
Helicase_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UOE87284
LinkDB
All DBs
Position
2:637062..638441
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AA seq
459 aa
AA seq
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MSTSKFSSIALKPELLNTLDSLGYTEMTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGL
GVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLERERIDLSELNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQ
TLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLH
HQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDE
YMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGKKAKLRAGDILGALTGQGGIDGKSVGKI
NLFAMRAYVAVERSMAKKALGKIESGKMKGRQFRARILK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacttcaaaattctcttcaatcgcccttaaacctgagcttctaaacacgttagac
tctcttggttatactgaaatgacgcctattcaagcgttgagtcttcctactattctggat
ggcaaggatgttatcggtcagggtaaaacgggttcaggtaaaacagctgcctttggttta
ggcgtgctgcaaaacctacgcgttaagcgttttcgtgttcaatctttagtgttatgtccg
actcgtgagcttgcagaccaagtagcaaaagagatccgtactcttgctcgtggcattcac
aatattaaagtgctgacactatgtggcggtatgccaatgggcccacaaattggttcatta
gagcatggcgcacacattcttgtgggcactcctggtcgtatcctggaccacctagagaga
gagcgtattgacctgtctgagttgaacacacttgtgttagatgaagccgatcgcatgctg
gaaatgggtttccaagatgcactagatgctgttattgaagcagcaccaaaagatcgtcaa
acgttattgttcagtgcaactttccctaaacagattaaatctgttgcagaccgcatcatg
aataaccctgaaatggtgaaggttgaatcaacgcacgatcactcaagcatccaacaacac
ttttacaaggttgaaggtactgaagctcgtgatgacgcactagagctaatgcttcttcat
catcaaccagagtcagcggttgtgttctgtaatactaagaaagaagtgcagaacgtaaat
gatgagctaagccaccgtggtttcagtgttatcgagctccatggcgacatggaacagcgt
gaacgtgaccaagctttggttcagttctcaaacaaaaccatctctatcttggttgcaacc
gatgttgccgctcgtggtcttgatgttgataaccttgatgcagtgttcaactttgagttg
tctcgcgatcctgaagtacacgtgcaccgcatcggtcgtactggtcgtgcaggaagcaaa
ggtgtcgcaattagcttctttagcgaaaaagagatgcaccgtgttgctcaaattgatgag
tacatggatatgccaatcgaaccgtctcagttgccagctaaaccaatcgctaagccgtac
tactcaaacatggtaaccatccagattgatggtggtaagaaagcgaaacttcgcgcaggc
gatatccttggtgcgttgacaggccaaggcggtattgatggtaagtcagtaggtaagatc
aacttgttcgcgatgcgtgcttacgttgctgtagaaagatcaatggctaagaaagcatta
ggtaaaatcgaatcaggtaaaatgaagggtcgtcaattccgcgcccgaattctgaagtaa
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