KEGG   Vibrio splendidus: LTQ54_18965
Entry
LTQ54_18965       CDS       T08240                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vsl  Vibrio splendidus
Pathway
vsl03030  DNA replication
vsl03430  Mismatch repair
vsl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LTQ54_18965
   03430 Mismatch repair
    LTQ54_18965
   03440 Homologous recombination
    LTQ54_18965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vsl03032]
    LTQ54_18965
   03400 DNA repair and recombination proteins [BR:vsl03400]
    LTQ54_18965
Enzymes [BR:vsl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LTQ54_18965
DNA replication proteins [BR:vsl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LTQ54_18965
DNA repair and recombination proteins [BR:vsl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LTQ54_18965
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 UNC83_middle_bundle DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: UOE87287
LinkDB
Position
2:complement(639909..640532)
AA seq 207 aa
MAPNSADSVIVLDFETTGLSPNMGDRAIEIGAVKLVNGEVVDTFQQLMNPGFRVSGFIES
YTGISNRMLSTAASCSEVMDEFADFIQGSQLVAHNASFDKRFLDAELDFIGRDYTGKFAC
SMLIARRLIQDAPTHKLGDLVRFKNIDNDGTFHRALADSEMTARLWLLMIDELQSDHGIQ
QPSFQLMQKISKTAKGSIPKLLMSNRG
NT seq 624 nt   +upstreamnt  +downstreamnt
atggctccaaactccgcagactccgttatcgttctcgatttcgaaaccacaggcttatca
ccaaacatgggtgaccgagcgattgaaatcggtgcggttaaactcgttaatggcgaagtc
gtcgacaccttccagcagctcatgaacccgggatttcgcgttagtggattcattgaaagc
tataccgggatcagtaaccgtatgttaagcacagcggccagttgcagtgaagtgatggat
gagtttgcagactttatccaaggcagccaacttgttgctcacaatgcgtcgtttgataag
cgctttctcgatgcggaattagactttattggccgagactacacaggcaagttcgcttgc
tcaatgttgattgctcgccgtctaatccaagacgcaccgactcataagctaggcgacctt
gtgcgtttcaaaaatatcgacaacgacggtactttccacagagcgttagccgattcagaa
atgacagcacggttatggttattgatgattgatgaactgcaaagtgatcacggtattcaa
cagccgagctttcaattgatgcaaaaaatatctaagacagctaaaggctcgattccaaag
ctgctgatgagtaacagaggctaa

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