Vibrio splendidus: LTQ54_19230
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Entry
LTQ54_19230 CDS
T08240
Name
(GenBank) winged helix-turn-helix domain-containing protein
KO
K03765
transcriptional activator of cad operon
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsl03000
]
LTQ54_19230
Transcription factors [BR:
vsl03000
]
Prokaryotic type
Other transcription factors
Others
LTQ54_19230
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
TPR_14
TPR_2
TPR_1
ARM_TT21
Drf_FH3
Motif
Other DBs
NCBI-ProteinID:
UOE87337
LinkDB
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Position
2:699439..700983
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AA seq
514 aa
AA seq
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MLEKNISFIVDEWQFMPNEGQIQFADSCITIDNRLTKLLEFLCLNPGLTHTRDELIEEVW
SGSVLTDQVVTQAVFELRKVLKTHSKRTSSYIVTVPKRGYRFDGEVRVEKVELQKPASQK
PALQKTGQLDVNERQSTPETQELVEIEGREEGYVKPSENSPRSRKLHYILAFLAVVIVLQ
SSYMWFSQNKQSLSQVGSAHSLSHYEFRYVVLNVTEEVKAQPELYGIVIKLIEHIGFYSN
IRVVKSDEHKKLAAIEFNISTAKSSDGKKTRLLVKYVNRASGGVHLNRRYSTNFARFHET
FPAMIDDLLRAMYIDVPEEELQRNISVFPQDKESVKALMSATGVSYSTVDFDMALKHFRE
ARALAPDNAYAISVSYISEVLAVFSKDEENIQPRIKALNEQYSSSLSAILKRGNNPRVCE
ANAILALSQSDPDKALKILLSIPYNQHTPLTYLLMAKAEEARGHITGAKELYLQATQNTS
SPIALTLAGPLFFDSNLDKLIEQLQGVKLDVDGK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaaaaacatcagttttatcgtagatgagtggcagtttatgcctaacgaaggg
cagattcagtttgctgattcgtgtattacgattgataaccgcctcactaaattgcttgag
ttcttatgcttgaacccgggtttgactcatacgcgtgatgagttaattgaagaggtgtgg
agtggtagtgtattaaccgatcaagttgtcacccaagcggtatttgaactacgaaaagtt
ctgaaaacacacagtaaaaggacaagcagttatattgttaccgttccaaaacgtggttac
cgatttgatggtgaagtgagagttgagaaagtagaactccaaaaacccgcttcccaaaaa
cctgctctccaaaaaactgggcagcttgatgttaatgagcgccaatcaacgcctgaaacc
caagagcttgtcgaaatagaaggccgggaagagggctatgtaaagccatcagaaaattct
ccaagaagtagaaagctgcattacatactggcgtttttggcggttgtcattgttttacaa
tcatcatatatgtggttttctcagaacaaacaaagtctttcgcaagtaggctcggctcac
tcattaagtcattatgaatttcgttatgttgtactgaatgtaacggaagaggttaaggcg
cagcctgagctctatggaatcgtaattaagctgattgaacatattggtttttatagcaat
atcagagtggttaagtctgatgaacataagaagttggccgcgattgagtttaatatctca
acggcaaaaagcagtgacggcaagaaaacacgtttattggtgaagtatgttaaccgagcg
tcgggaggcgtgcatttaaatcgtcgttattccaccaactttgctcgtttccatgagacg
tttccagcgatgattgacgatctattgcgtgctatgtatatcgatgtacctgaagaagag
ttacagcgcaatatttctgtgttcccacaggataaagagtcggttaaggcgttgatgtct
gcgaccggggtttcttatagcaccgtggattttgatatggcgcttaagcattttcgagag
gccagagcgctggctccagataacgcttatgctatttcagtgagttacataagtgaagtg
ctggcggttttctctaaagatgaggaaaatattcaacctagaattaaggcgttgaacgag
caatattcctcatctttgtctgccattcttaagcgaggaaacaatcctcgtgtttgtgaa
gcgaacgcaatattagcgctgtctcaaagtgatcctgataaggcgttaaagatcttgttg
tcgattccttacaatcaacatacccctctgacttatctgttaatggctaaagcagaagag
gcacgtggccacatcactggcgccaaagagttgtatctgcaagcgacacaaaatacctct
tcaccgattgcattgacgctagctggtccgttgttctttgacagtaatttagacaaactg
attgaacaacttcagggcgtcaaactcgatgttgacggtaaatag
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