Vibrio splendidus: LTQ54_20885
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Entry
LTQ54_20885 CDS
T08240
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vsl
Vibrio splendidus
Pathway
vsl00550
Peptidoglycan biosynthesis
vsl01100
Metabolic pathways
vsl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LTQ54_20885 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LTQ54_20885 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsl01011
]
LTQ54_20885 (mrdA)
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LTQ54_20885 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LTQ54_20885 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UOE86161
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All DBs
Position
2:1094255..1096153
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AA seq
632 aa
AA seq
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MNHKRVKMRDHKKEVNLFKNRVTVAFCGILLFTLVLVGNLYRLQVENFKSYQTRADGNRI
KVLPIPPTRGLIYDRNGVLLAENELVFNLTMIPEQTDDVDAMLTKLDKYIPREAEQIARF
KKRYHNTRRFKSVTILENLSEEEIAKFSVHQYQFPGLSIDTSLKRFYPNGEVLTHVLGYV
AHINDSDLKRLEEKGIEANYQATTIIGKLGVERYYEDILHGTKGYQEVEVNSRGRVVRTI
EYVAPVAGKDIVLNIDLELQKYVFDQLDHRTGSAVVLDPKDNSVLAMASSPSYDPNLFVD
GISSKNYQRLLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLQEHVISEDTIRNDHGSWQ
IPGSKRNSKSWRDWKRWGHGPVDVTQAIEESVDSFFYQTAFDLGIDRISSWMNRFGFGEP
TGIDIYEESTANMPTREWKMMRYRTPWYQGDTVPIGIGQGYWTSTPMQLAKATSVLVNHG
KVMPPHILRAILDHGEDFDTQQLVTPEPMPSITEVPDKIWDVPINAMRLVNHGSRGSGRR
AFKGTSYTSGGKSGTAQVFDLAKDQVYNSKKLAKHLLDHALYTAFAPYEHPEYVATVVIE
HGNGGSKVGAPYIRKVLDYAFEHKSGESKDHS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaacgcgttaagatgcgtgaccataaaaaagaagtaaatctgttcaaaaac
cgtgtaaccgttgcgttttgtgggatcttgctgttcactcttgtcttagtcggcaacctt
taccgacttcaagtcgaaaattttaaaagctatcaaactcgtgccgatggcaacagaatc
aaagtattacctattcccccgactcgcgggcttatttacgaccgcaatggtgtgttgctc
gccgagaatgaacttgtctttaatctgacgatgattccagagcaaactgatgatgtcgat
gcaatgcttaccaagttggacaaatacatcccgcgagaggctgagcagattgctcgtttc
aaaaagcgttatcacaacactcgccgtttcaaatctgtcacgatattagagaacctaagc
gaagaagaaattgctaagttctcagtgcaccagtaccaattccccggcttatcgattgat
accagcttgaaacgattttatccaaatggagaagtacttacccatgtcttgggatatgtc
gcacacatcaatgatagcgatcttaagagactagaagaaaaaggcatcgaagcgaattat
caagcgactaccattatcggtaagcttggtgtcgaacgctattacgaagacattttgcac
ggtaccaaaggttatcaagaagtcgaagtaaacagccgtgggcgagtcgtccgcaccatc
gagtatgtagctccggtagcaggaaaagatatcgttttaaatatcgacctcgaactacaa
aaatacgtattcgatcagcttgatcaccgaacaggcagcgcggtcgttcttgacccgaaa
gacaacagtgtacttgcaatggcatcaagccccagctacgacccgaacctctttgtcgac
ggtatttctagcaagaactatcaacgcttgttgaatgatcctgctcacccattggtaaac
cgcactactctcggcgtttatcctccggcgtcaaccgtgaaaccatttatggcagtggca
ggactgcaagaacatgtcatctccgaggataccattcgtaatgaccatggttcatggcaa
attcccggttccaagcgtaactctaaatcatggcgtgactggaaacgctggggtcacggc
cctgtcgacgttactcaagccattgaagagtctgtggattcgttcttctatcaaaccgct
tttgacttgggcatcgaccgtatctcaagctggatgaatcgttttggttttggtgaacct
acaggtatcgatatctatgaagagagtaccgccaacatgccaacccgagaatggaagatg
atgcgttatcgtacgccttggtatcaaggtgacacagttcctattggcattggtcagggt
tattggacatcgacaccgatgcaactggcaaaagcgacttcagtgttggtcaatcatgga
aaggtgatgccacctcatatcctgagagcaatcttggatcatggtgaggactttgacaca
caacaactcgttacacctgaacctatgccgtctatcactgaagtccctgacaaaatatgg
gatgtacctatcaatgcaatgagactggtaaaccacggtagccgaggtagcggtagacgt
gcatttaagggaactagctacaccagcggcggaaaatcaggtacggcacaagtatttgat
cttgcgaaagatcaggtctacaactcgaagaagctggctaagcatttactcgaccatgcg
ctttacacggctttcgcaccttacgagcaccctgagtatgtcgcgacggtggtcattgag
cacggcaacggcggttcaaaagttggcgcgccatatatccgtaaagtactcgattatgca
tttgagcataaaagtggtgaaagcaaagaccactcgtag
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