Vibrio splendidus: LTQ54_22590
Help
Entry
LTQ54_22590 CDS
T08240
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_22590
Transporters [BR:
vsl02000
]
Other transporters
Pores ion channels [TC:
1
]
LTQ54_22590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF5777
Pico_P1A
DEXQc_Suv3
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
UOE86484
LinkDB
All DBs
Position
2:1520726..1521796
Genome browser
AA seq
356 aa
AA seq
DB search
MKRLSKIMCAVVAASGLAAAPSIAATTYVGAKVGIGWLDSACVAGAKCDDDAIGAGIYSG
YNFNDKFGIELSSDFLGDYKTSFSKNGTTAAFSDPLIAISLTPMYRLAVQQEFDVFFKAG
PAYISHGGEDDVVLSAGIGLEKQLSSDWALRVEYQYFDDFDDNYVQDLNSNLLSVGVSYN
FGTGNTTASAAAATASAVAVTQAPSEPITEPAVVVEEKTTVVVTKAQTESYSQEMFATNS
TELSTDGKIALMPLVEVLKAHPQSTVDVVGHTDSTGAAEYNMMISKKRAAAVAAYIEEQG
IEADRITASGEGEENPIASNDTAEGRAQNRRVDATIPGFEYQEEVKVEEVVVEATE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactgtcaaaaatcatgtgtgctgttgttgccgcttcaggcctagcagcagcg
ccttctattgctgcaaccacttatgtaggtgcaaaagtggggataggctggctagacagc
gcatgtgtagccggtgctaaatgtgatgatgatgcaattggtgcaggcatctactctggt
tacaattttaatgacaaatttggtattgagctaagctcagacttccttggcgactacaag
acaagcttttcaaaaaacggtacaacagctgcgttcagcgacccactaatcgcaatctcg
ctaactccaatgtaccgtctagcagtacaacaagagtttgatgtattcttcaaagcgggc
ccggcatacatttcacacggtggcgaagatgacgttgttctttctgctggcatcggtcta
gagaagcagctttcttctgattgggcattgcgtgttgaataccaatattttgatgatttc
gacgacaactacgttcaagacctgaactcgaacctactatcagttggtgttagctacaac
ttcggtactggcaacacaacagcatcagcggcggctgcaacagcttctgcagtagcagtg
actcaagcgccatctgagccaatcacagagcctgcagttgttgttgaagagaaaacgact
gtcgttgtaactaaagcgcaaacagagagctactctcaagaaatgttcgcgactaacagt
actgaactgtctacagatggcaaaattgcattaatgccattagttgaagtacttaaagct
caccctcaatcaacagttgatgttgttggtcacacagactcaacaggcgcagctgaatac
aacatgatgatctctaagaagcgtgcagcagctgtagcggcatacatcgaagagcaaggc
attgaagcagaccgaattacagcgtcaggtgaaggcgaagagaatccaatcgcatcaaac
gatacagctgaaggccgtgctcaaaaccgtcgtgttgacgcaacgatccctggctttgaa
taccaagaagaagtcaaagttgaagaagttgtcgtagaagctactgaataa
DBGET
integrated database retrieval system
