Vibrio splendidus: LTQ54_23835
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Entry
LTQ54_23835 CDS
T08240
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vsl
Vibrio splendidus
Pathway
vsl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTQ54_23835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsl02000
]
LTQ54_23835
02044 Secretion system [BR:
vsl02044
]
LTQ54_23835
Transporters [BR:
vsl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LTQ54_23835
Secretion system [BR:
vsl02044
]
Type I secretion system
RTX toxin transporter
LTQ54_23835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
DUF87
ABC_ATPase
AAA_18
AAA_5
RsgA_GTPase
AAA_29
nSTAND3
SbcC_Walker_B
AAA_24
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UOE86716
LinkDB
All DBs
Position
2:1836726..1838831
Genome browser
AA seq
701 aa
AA seq
DB search
MTQNEVLTLKCINLYLSILGVKKDITNIKNTTEESKNFKDELKKIQINNKVNVVIKRSKT
KKINNITTPVILFDAQGLPFILAKTNKGSCLIQNPNKESPEVISYDKINSIWNKSWLEIK
QPQSRFDITWFIPEFLQHKRILGEIFLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLD
VLVIGLVITGIVEVILRGLREYQYAHTANRIDIQLGLKLVKHLLGLPLMFFKTRQVGAIV
TRVRELDTVREFLTGSMFTLTVEFLFMFVFLYVMSLLSSTLTWLFIATIPLYVLLAWWLT
PRMQTAVEEQFTHAAANTSFLTETVAGSETLKSLAVEPRFVRRWDEQTEKMVSTGYAVQQ
INNRSNHAVQLIQKVTSVGILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLSRMVELWG
QFIQTRVALEKLGDMLNLPVEQHTGNDMVTMQGAISFKNVLFRYQLDTPPTLHNLSLDIQ
AGETLGVVGTSGSGKSTLARLLLRLYNPEQGLITVDDTPLNQISIQQLRQQIGIVLQENY
LFNKSVCENIAQSKPEASLEEVIEAAKLSGAHEFIMKLPIGYDTILAEGGQSLSGGQKQR
LAIARTLLSNPKIIILDEATSALDDESQALIQSNMANIAKGRTVITIAHRLSTVRDCDRI
IVLHQGSIVEQGSHQQLLTLGKQYKQLWQLQQELKQEDSNA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaatgaagttctaaccctgaagtgtataaacctatacttaagtattttaggc
gtaaaaaaagacataactaatataaagaacacaactgaagaatcaaaaaacttcaaagat
gaattaaagaaaatacaaataaacaacaaagttaatgttgtaattaaacgctcaaaaaca
aaaaaaattaacaatataacaacacctgttattctatttgatgctcaagggttaccattt
attttagctaagactaataaaggatcttgtttaatacaaaaccctaataaagaatctcct
gaagttatttcttatgataaaatcaactcgatatggaataaaagttggcttgaaataaaa
caacctcaatcacgttttgatatcacctggttcattcctgagtttttgcaacacaaaaga
atactcggggaaatttttttgttttcttttgtattgcaaatactcgccttaatctcaccg
ctattttttcaggttgtgatggataaagtgcttgtacatcaagcttggtcaacccttgac
gtgcttgtgatagggcttgtgatcactggcattgtagaggttatacttcgcggcttgcgc
gaatatcaatatgcgcacacagccaatagaattgatattcaattggggcttaaattagta
aagcacttacttggccttcctttgatgttcttcaaaacacgccaagtaggcgctatcgta
actcgagtgcgtgagctcgataccgtacgagaatttttgacaggctctatgttcacttta
actgtcgagttcttgttcatgtttgtcttcctctacgtaatgagcttactttcgtcgacc
ctcacctggttatttattgcaaccattcctctttatgtattgctcgcttggtggcttacg
cctcgaatgcaaacagcggtagaagagcaatttacacatgctgctgcaaacacctcattt
ctaacagaaacagtggctggcagtgaaactctaaaaagcttagccgtagagccacgcttt
gttcgccgttgggacgaacaaacagaaaaaatggtttctactggatacgcagtccaacaa
atcaacaatcgctctaatcatgctgttcaacttatacagaaggtaaccagtgtcggtatt
ttatggctaggagcaactgaagtattgtcattggagatgactattggccaactcattgcc
ttcaacatgatgacgaatcacatcgctcaacccttatctcgtatggtcgaactatggggg
cagtttattcaaacccgcgtagcgttagagaaattaggagacatgctcaatttgccggta
gaacaacatacaggtaacgacatggtgacaatgcaaggggctatttctttcaaaaacgtt
ctgtttcgttaccaacttgatacccctcctactctccataatttatctttggatatacaa
gcaggagaaaccttaggcgttgtcggcacatctggttctgggaaaagcaccttagctcga
ttattactgcgactatacaacccagagcaagggttaatcacggttgatgacactccactg
aatcaaattagtattcagcaactgcgccaacaaatcggcatagtgctgcaagaaaactat
ttatttaacaaaagcgtttgcgagaatattgcccaatcaaaacctgaggcaagcttagaa
gaggttatcgaagcggcgaagctctctggagcccacgagtttattatgaagctcccaatt
ggctatgacacgatattagccgaaggcgggcaatctctttctggcgggcagaagcaacgg
ctcgcgattgcacgaactctgctttctaaccccaaaatcattattttagatgaagctact
agtgcacttgacgatgaatcacaggcgttgattcaatccaatatggcgaacatcgcaaag
ggccgaacggtcattactatcgctcaccgattatccaccgtacgagattgtgatcgaatt
attgttcttcaccaagggagtatcgtcgagcaaggcagccaccaacaattattaacgttg
ggtaaacagtacaaacagttgtggcaacttcaacaagagctcaaacaagaggattcaaac
gcatga
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