Vulcanisaeta souniana: Vsou_00300
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Entry
Vsou_00300 CDS
T08588
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
vso
Vulcanisaeta souniana
Pathway
vso03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vso00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Vsou_00300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vso03021
]
Vsou_00300
Transcription machinery [BR:
vso03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
Vsou_00300
Prokaryotic type
Archaeal type
TFE
Vsou_00300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_IclR
Rrf2
Zn_Ribbon_YjdM
zf-C2H2_5
Motif
Other DBs
NCBI-ProteinID:
BDR90937
LinkDB
All DBs
Position
22485..23021
Genome browser
AA seq
178 aa
AA seq
DB search
MVEDLETSLFLEYAKRRISFEYDNEETGELAVKILRTLIERNEAIPDETLALILGTSATE
IRRILHVMHKTGLVGLARESVDQYRYEYKWFLNKDFIRKFLSQHINKVTTKLMHRINTLS
STTLYICPTCFRGYTLDEAYEYDFRCPRDDTELMQIDTPSEIAFLSNIIKNLRGEETE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggacctagagacatcattattcctagagtatgcaaagaggaggatatccttt
gagtatgataatgaggaaaccggggaattggcggttaagatcctcaggacattaatagag
aggaatgaggcaatacccgatgagacgctggctttaatactgggaacaagcgccacggaa
attaggaggatattgcatgtaatgcataagacgggccttgtgggtctagccagggaatcc
gtggatcaatacaggtatgagtataagtggttccttaacaaggattttattaggaaattc
ctaagtcagcatattaataaagtaacaacaaagttgatgcataggataaataccctgagt
tcaaccacgctttatatatgcccaacctgcttcaggggttatacactggatgaggcatat
gagtacgactttaggtgcccgagggatgatactgaattaatgcagatcgatacaccatca
gaaatagcctttctaagtaacatcattaaaaatctacgtggagaagaaacggaataa
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