Vulcanisaeta souniana: Vsou_04200
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Entry
Vsou_04200 CDS
T08588
Name
(GenBank) RNA modification protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
vso
Vulcanisaeta souniana
Brite
KEGG Orthology (KO) [BR:
vso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vso03016
]
Vsou_04200
Enzymes [BR:
vso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Vsou_04200
Transfer RNA biogenesis [BR:
vso03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Vsou_04200
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
U_exon
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
BDR91327
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Position
402830..404188
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AA seq
452 aa
AA seq
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MDNKFTVVTFGCWLNKADSDLVITKLKLLGWEYVEDIDSADTIVINTCAVREEAERNELK
LLAELSKKYPSKRIIVTGCLTRVRPAAIRESSPNAVIVTSHGVESIDEIVGGGDNVYVYD
DRPMKYLPNYYPELHGHRYVVPIQVGCLGNCSFCVTKIGRMGFGKVRSYDKHDLINAIKR
AVNSGAREVYLTGQEISAYGRDKGYDLVDLLEELLREIDGRFMVRLGMMEPLELSRILDG
LLDIVKSDWRVYRFFHIPVQSGSDRILTLMKRKYSASFFRDIVTRIRRVFPDATIVTDVI
VGFPGETDDDFWASVRLIEELGIDKVNLARYSRRPFTEAAYMEQVPEQVKKERSKVATEI
FSKVSLERNKPFIGREMWGIASEVDFRGENYIVRSYNYKPIAVKRVDIGAFVKARIIDAT
PHRLIGELLASEELGIRYRVDFRISEGLDLMS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggataataagttcactgtggtgacatttggttgctggttgaataaggcggatagtgac
ctagtgatcaccaagcttaagttgttgggttgggaatacgttgaggacattgattcggca
gacactattgtcataaatacttgcgccgttagggaagaggcggagaggaatgaattgaag
cttttggcagaattgagcaagaaatacccaagcaagaggattatcgttactggctgccta
acgagggttagaccagcggcgataagggagtcctcgcccaatgcagtgattgtcacatca
catggtgtggaatccatagatgagatagtggggggtggtgataatgtgtatgtttacgat
gataggcccatgaagtacctgcccaactattatcccgagcttcacggacataggtatgtt
gtaccaatacaggttggttgcctgggtaattgtagcttctgcgttactaagattggcagg
atgggcttcggcaaggtgagaagttatgataagcatgacttaattaatgccataaagagg
gccgttaacagtggtgcacgggaggtgtacttaaccgggcaggaaatcagtgcgtatggt
cgtgacaagggttatgacttggttgatctacttgaggagttattgagggagattgatggt
aggttcatggttaggttgggcatgatggagccccttgagctaagtcgcatactcgatgga
ttacttgacatagtgaagtccgattggcgtgtgtataggttcttccatattcccgtgcag
agcggtagtgaccgtatactaacccttatgaaaaggaagtactcagccagtttctttagg
gatattgtgacgaggattaggagggtttttcccgatgccacgatagtcaccgacgtcatt
gttggctttcccggtgaaaccgatgatgatttctgggccagtgtgagactaattgaggag
ttgggcattgacaaggttaacctggccaggtatagccgtagacccttcactgaggcagcg
tatatggagcaagtgcctgagcaggttaagaaggagaggagtaaggtagctacggagatc
tttagcaaagtgtcgctggaaaggaataaaccgtttattggtagggagatgtggggtatt
gccagtgaggtggattttaggggcgagaattacattgttcgttcttataactataaaccc
atagccgtgaaaagagtggacatcggcgcattcgtaaaggctaggattatagatgcaacg
ccccataggttaattggcgaactcctggcgtctgaggaattgggcattaggtatagggtt
gatttcaggatctccgaaggccttgacttaatgtcttaa
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