Vulcanisaeta souniana: Vsou_19410
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Entry
Vsou_19410 CDS
T08588
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
vso
Vulcanisaeta souniana
Pathway
vso03022
Basal transcription factors
vso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vso00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Vsou_19410
09124 Replication and repair
03420 Nucleotide excision repair
Vsou_19410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vso03021
]
Vsou_19410
03036 Chromosome and associated proteins [BR:
vso03036
]
Vsou_19410
03400 DNA repair and recombination proteins [BR:
vso03400
]
Vsou_19410
Enzymes [BR:
vso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Vsou_19410
Transcription machinery [BR:
vso03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Vsou_19410
Chromosome and associated proteins [BR:
vso03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Vsou_19410
DNA repair and recombination proteins [BR:
vso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Vsou_19410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
HBB
AAA_22
PhoH
nSTAND3
AAA_30
AAA_25
SNF2-rel_dom
DUF2972
Motif
Other DBs
NCBI-ProteinID:
BDR92848
LinkDB
All DBs
Position
complement(1791605..1793476)
Genome browser
AA seq
623 aa
AA seq
DB search
MSGIESLIRRYFPYDTFRKYQWEIAKTIYDALSSGRVALIEAPTGVGKTASALAASLAYS
EESGTRALFLVRTKNEAQAPIRELRRLRDRGVDVGYAVIRNRPDMCCMVSTRRLPYEEFL
EECRLLRSSDECPYYTGMRRINIDNVMTYVVDKAGNINEYVSSLCSSGVCPYEVSKDYLE
RARVGIMTYYYVFSISKPETVNIDIKNSVLIIDEAHNLPDAISSLNTVNLALTSITSSMA
EVKRFIDDEELRNRTLRILRSLQSYMVKLGKVLEEENMVSLELGDVLQFFEDFQAISEAY
YEIIKKKRSVGVPIPYTPLSRILDFHKAILNKVSGFGMFLTRDEQGFSLVYKCIDPSIIG
SPVLNNANGVILMSGTLPPRDYVVGMLGINRSVLEHRIGFRNYIRPENYGVFVYDGVTTR
YAERDEEEYAKIANVLSRIYQAFTLDKAILSIFPSYVVLKAVRKYLSPGVKYIMELGNTS
IDDLIRELRNDRRRLIMAVAGGKLVEGVEYRLGTENLLGLIIIVGIPYPEPNDYLDSVME
ILAARLNDRSLAWELTYQWPAIVRIKQAVGRAFRSENDRALVILMDRRFRENRLAKIFED
YFGKYVIVDDEELINKIMHSTPQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcattgaatcattgatcaggaggtatttcccatacgatacattcaggaaatac
cagtgggagatagcgaagactatatatgatgcattgtcgagtggtagggtcgcgttgatt
gaggcgccaacgggggtcggcaagaccgccagcgcattggcagcctcactggcctactct
gaggagagtggtaccagagctctattccttgtgaggactaagaatgaggctcaagcccca
attagggaattacgtaggttgagggataggggtgttgacgttggttacgcagtgattagg
aatagaccagacatgtgctgtatggttagtacgcgtaggcttccctatgaggagttcctc
gaagaatgcagactgctcaggtccagtgatgagtgtccctattataccggcatgaggagg
attaatattgataatgtgatgacctacgtagttgacaaggcaggtaatattaatgagtac
gtatcatcactttgttcatcaggtgtctgcccatatgaagtgtctaaggattacctggag
agggctagggttgggatcatgacctattactacgtatttagtattagtaaacccgagacc
gtgaatattgatattaagaattctgtgttaataattgatgaggcacacaacctacctgat
gccataagtagcttaaacacggttaacttggcattaacgtcaataacatcctctatggcc
gaagtcaagaggttcatcgatgatgaggaattgagaaataggacgctgaggatattgagg
agtcttcaatcatacatggttaagttgggtaaggtcctcgaggaggagaacatggtatct
ctagagctcggtgatgttcttcaattctttgaggacttccaggcaattagcgaggcctac
tatgaaataataaagaaaaaaagaagtgttggggttccaataccatacacaccgttgtct
cgcatattagactttcataaggccatacttaataaggtgagtggctttggcatgtttctt
acgagggatgagcagggcttttccctggtttacaaatgcattgatccttcgataataggc
agtcctgtacttaataatgccaatggggttatcttaatgagtggtacattgcctcctagg
gattatgtggtgggcatgttgggcattaacaggagtgttcttgagcataggattggcttc
aggaattatattagacccgagaattatggtgtttttgtatatgatggagtaaccacgaga
tatgcggagagggatgaggaggagtacgccaagatagccaatgtgctaagtaggatttat
caagccttcacgcttgacaaagcaatactatccatatttccatcatacgttgtacttaag
gccgttaggaagtacctaagtccaggtgttaaatacataatggaattgggtaatacgtcc
attgatgacctaataagggaattaaggaatgaccgcaggaggttaataatggccgtagct
ggcggcaaacttgttgaaggtgttgaatacaggctcggtacggaaaacctactcgggctc
ataataattgttggtattccatacccagagcccaatgattacctagatagcgttatggaa
atacttgcggccaggcttaatgatagaagcctggcttgggaactaacttaccagtggccc
gccattgttaggattaagcaggcggttggtagggcctttaggtcggaaaacgatagggcc
ttggtgatcctcatggaccgcagatttcgggaaaataggctagccaagatctttgaggat
tactttggtaagtacgtcattgtcgatgacgaagaactaataaataaaataatgcattct
actcctcagtaa
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