Vibrio atlanticus: VS_0011
Help
Entry
VS_0011 CDS
T00812
Name
(GenBank) DNA polymerase III beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03030
DNA replication
vsp03430
Mismatch repair
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VS_0011
03430 Mismatch repair
VS_0011
03440 Homologous recombination
VS_0011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_0011
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0011
Enzymes [BR:
vsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VS_0011
DNA replication proteins [BR:
vsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VS_0011
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VS_0011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
CAV17068
UniProt:
B7VGI5
LinkDB
All DBs
Position
1:9001..10101
Genome browser
AA seq
366 aa
AA seq
DB search
MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEDNVLSMTATDLEVELISRVTLE
GDFEAGSITVPSRKFLDICRGLPDSSVITVVLDGDRIQVRSGRSRFSLATLPAADFPNIE
DWSSEVEVSVTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIEGSILRSVATDGHRMAVS
QAQLGADFAQKQIIVPRKGVQELVKLLDAPEQPVTLQIGNSNVRAEVNNYVFTSKLVDGR
FPDYRRVMPQNTTKTLEAGCDELRSAFSRAAILSNEKFRGVRVNLVDSEMRITANNPEQE
EAEEVLDVNFDGDALEIGFNVSYVLDVLNTLRCEQVRISMSDANASALIENAQDDSAMYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaccattgaacgtagtcacctgattaagccattacaacaagtatctggcgca
ctcggtggcaggccaacgcttccaattctaggaaatctactgattaaagtagaagataac
gtgttgtcgatgacagcaacggatctagaagttgaactgatcagccgtgtaacgcttgaa
ggtgatttcgaagcgggcagcattactgtaccttcacgtaaattcctagatatctgtcgt
ggcttgccagacagctcagtgatcactgtggtattggatggcgatcgtattcaggttcgt
tctggtcgtagccgcttctcattagcaacattacctgcggcagattttccaaacattgaa
gactggagcagtgaagttgaagtgtcagtgacacaagctgagctacgcggtcttatcgag
aaaacccaattctcaatggcgaaccaagatgttcgttattaccttaacggtatgttgttt
gagattgaaggttcaatcctgcgaagtgtcgcaactgatggtcaccgtatggcggtatct
caagcacaattgggtgccgattttgctcagaagcagatcattgttcctcgtaaaggtgtg
caagagttagtgaagctactggatgcaccagagcaaccggtaacgctgcagattggtaat
tctaatgtgcgtgctgaagtgaacaactatgtcttcacttctaagctggttgatggtcgt
ttccctgattatcgccgcgtaatgccgcaaaatactaccaagacacttgaagctggttgt
gatgaattacgttcagcattttctcgtgctgcgattctgtcgaacgaaaaattccgtggt
gttcgcgttaatcttgtcgatagcgagatgcgcattaccgcgaacaacccagaacaagaa
gaagcggaagaagtgttagatgttaacttcgacggtgacgcgctagagattggcttcaac
gtaagctacgtattggatgttctgaacacactacgttgtgaacaagttcgcatctcaatg
tcagacgccaatgcgagtgctcttatcgagaacgcacaagacgacagcgcgatgtacgtt
gttatgcctattcgcttataa
DBGET
integrated database retrieval system
