KEGG   Vibrio atlanticus: VS_0066
Entry
VS_0066           CDS       T00812                                 
Name
(GenBank) ATP-dependent DNA helicase rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsp03400]
    VS_0066
Enzymes [BR:vsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VS_0066
DNA repair and recombination proteins [BR:vsp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VS_0066
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: CAV17107
UniProt: B7VH95
LinkDB
Position
1:58199..60217
AA seq 672 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQECGYKARNIAAVTFTNKAA
REMKERVGQTLGKGESKGLIVSTFHTMGLTIIRREYKALGLKAGFSLFDDQDQLALLKEL
TERQIDGDKDLLRALMSTISNWKNDMLTPDQAKARAQGEQEQLFAFCFEMYQKQMKAYNA
LDFDDLIAMPVLLLKTNQEVRERWQSRIRYLLVDEYQDTNTSQYELVRLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGEDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLNAKNEEHEAERITGEIIAHKFLNRTEYKDYAVLYRGNHQSRLIEK
ALMQNRVPYKISGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPVTLEK
LGSYANMRGKSLFEASFEMGLEQTLTGRGLENLRRFSDWIVRISDNAERGNTVEAVRSLV
RDINYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNYDKEEKTLREVVQRLTLRD
MMERGEDDDDADQVQLMTLHASKGLEFPYVFLMGAEEGILPHQTSVDEGNVEEERRLMYV
GITRAQKELTFTKCRERRQYGELIKPTQSRFLDELPHEDVEWESVKKPQSAEERMEKGQA
HIANIRAMFNKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaactgaacccaagacaagatgaagccgtgaaatatgtttcgggcccctgtttagta
ttagcaggcgctggatcgggtaaaacacgtgttatcacgaataagattgcttacttggtt
caagagtgtggttacaaggcacgcaatattgcagcggtaacttttaccaataaagcggca
cgcgagatgaaagaacgtgtggggcaaactctgggtaaaggtgaatcgaaaggcctgatc
gtttcgacttttcataccatgggcttaactatcattcgtcgtgaatacaaagcgctgggt
ctgaaagcgggcttctctctatttgatgaccaagaccagttggcgctattaaaagagcta
acagagagacagatcgatggtgataaggatctgctgcgtgctttaatgagcaccatttcg
aattggaagaatgacatgctgacgccagatcaggcgaaagctcgagctcaaggcgaacaa
gagcagttgtttgcattctgttttgagatgtaccagaaacagatgaaggcatacaacgcg
ctcgattttgatgatctgattgcgatgccagtattacttctgaaaaccaatcaagaagtg
cgtgagcgctggcagtctcgtattcgctatttacttgtcgatgagtatcaagataccaac
accagccaatatgaattggtgcgtctgcttgtgggagagcgtggtcgtttgacggtcgta
ggtgacgatgaccaatctatttactcatggcgtggtgcaaaaccgcaaaacttggtgctg
ttaggtgaggattacccgaacttacgcttgatcaaactagagcagaactaccgctcaacg
agtcgaattttgcgtgcagcgaatatcttgatcgctaataacccacacgtttatgaaaaa
tcactgttctctgagatcccggacggtgaaaagctcaaggtactgaatgctaagaatgaa
gagcatgaagcagagcgtattacaggtgagatcatcgctcacaagtttttaaaccgcact
gaatataaagattacgcagtgctgtaccgtggtaaccaccaatctcgcttgattgaaaaa
gcgttgatgcagaaccgtgtgccttacaaaatttctggcggtacgtctttcttcgctaga
gctgagattaaagacatcatggcttacctccgcgtgttggtgaaccctgatgatgacaac
gcgtttctacgtattgtaaacacaccacgtcgtgagattggcccggtgacgcttgagaag
ttaggcagctacgccaacatgcgtggcaagagcttgtttgaagcgagctttgagatgggt
ttagagcaaactttgactggtcgtggtttagaaaacctgcgccgtttcagcgattggatt
gttcgtatttctgataatgctgaacgtggcaataccgttgaggctgttcgctctttggtt
cgtgatattaactatgaagattggttgtacgaaacctcggcaagcccgaaggctgcagag
atgagaatgaagaacgtttctgatctttatagttggatcgttgctgaccttgagggtgac
aactacgacaaagaagagaagaccctacgagaagtggttcaacgtttaacgctacgtgac
atgatggagcgtggtgaagatgatgacgatgcagaccaagttcaattaatgacattgcac
gcatcgaaaggcctagagtttccgtatgtgttcctgatgggagccgaagagggtatcttg
ccacaccaaaccagtgtcgatgaaggtaacgtagaagaagaacgtcgtcttatgtatgta
gggattactcgcgcgcagaaagagctgaccttcactaaatgtcgtgaacgtcgtcagtat
ggcgaattgataaagccaacacaaagccgattccttgatgaactgccgcatgaagatgtg
gagtgggaaagcgtgaagaagcctcaatccgcagaagaacgaatggagaaaggacaggca
cacattgccaacattcgtgcgatgttcaataagaagtga

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