KEGG   Vibrio atlanticus: VS_0135
Entry
VS_0135           CDS       T00812                                 
Name
(GenBank) Type II secretory pathway, component EpsD
  KO
K02453  general secretion pathway protein D
Organism
vsp  Vibrio atlanticus
Pathway
vsp03070  Bacterial secretion system
vsp05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VS_0135
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VS_0135
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsp02044]
    VS_0135
Secretion system [BR:vsp02044]
 Type II secretion system
  General secretion pathway protein
   VS_0135
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 SdrD_B
Other DBs
NCBI-ProteinID: CAV17168
UniProt: B7VHF6
LinkDB
Position
1:129296..131320
AA seq 674 aa
MKHWFKKSAWLLAGSLICTPAAIASDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDSGVLKIIKAKDSKTSAIPVVGDRDSIT
GDSVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
KRVDQAGDKEIEVVELKNASAAEMVRIVDALSKTTDAKNTPAFLQPKLVADERTNAILIS
GDPKVRSRLRKLIEQLDVEMATKGNNQVIYLKYAKAEDLVDVLKGVSDNLQSEKQTSTKG
SSSQRNQVMISAHSDTNSLVITAQPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDGV
NLGVQWGNLETGAMIQYSNTGASIGGVMVGLEEAKDKTVDRVVTPSDGSKPYTVKETEKG
DYSTLASALSGVNGAAMSVVMGDWTALISAVATDSNSNILSSPSITVMDNGEASFIVGEE
VPVLTGSTAGSSNDNPFQTVERKEVGIKLKVVPQINEGDSVQLQIEQEVSNVLGANGAVD
VRFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPFLGDIPVLGHLFKSTSTQVEKK
NLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAEQGLKLMADDNIPVLPKFGESMNH
PAEIQAFIDQMEAE
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaagcattggtttaagaaaagtgcatggttattggcaggaagcttaatctgcacaccc
gccgccatcgcgagtgattttagtgccagctttaaaggcactgatattcaagagtttatt
aatattgttggccgtaatctagagaagacgatcatcgtcgacccttcggtgcgcggaaaa
atcgatgtacgtagctacgacgtactcaatgaagagcaatattacagcttcttcttaaac
gtattagaagtgtacggctatgcagtcgttgaaatggactcgggtgttcttaagatcatc
aaagcgaaagattcaaaaacctcggcaatcccagttgttggcgaccgtgattcgatcaca
ggcgacagcgttgtgacacgtgttgttacggttcgtaatgtctcggttcgtgagctatct
cctctgcttcgtcaactgaatgacaacgcgggcgcgggtaacgtggtgcactacgatcct
gcaaatatcatcttgattaccggccgagcggcggttgtaaaccgtttagctgaaatcatc
aagcgtgtagaccaagctggtgataaagagatcgaagttgttgaactgaaaaatgcttcc
gccgcggagatggtgcgcattgtcgatgcattaagcaaaaccacagatgctaaaaacacc
cctgctttcctacagcctaaattagttgctgatgagcgtaccaatgcaattcttatctca
ggcgaccctaaagtacgcagtcgtttaagaaagttgattgaacagcttgatgtggaaatg
gcgactaagggtaacaaccaagttatctaccttaaatacgcaaaagcggaagacttagtt
gatgtgctgaaaggcgtgtctgacaacctgcaatcagagaaacaaacgtcaaccaaaggc
agttcatcgcagcgcaaccaagtgatgatttcggctcacagcgatactaactcattggtg
attaccgcacagccagacatcatgaacgcgctgcaagacgtgatcgctcaactcgatatc
cgtcgtgctcaagtgttgattgaagccttaattgttgaaatggcagaaggtgacggcgtt
aacctaggtgtgcagtggggcaacctagaaacgggagccatgattcagtacagcaatacc
ggtgcatcgattggcggtgtgatggtgggtctagaagaagcaaaagataaaacggttgat
cgagttgtaactccaagtgatggatcgaaaccctatacggtgaaagagacagaaaagggt
gactattcaacgttagcatctgctctttctggcgttaatggtgcagcaatgagtgtggtc
atgggcgactggacagctttgatcagtgcggtagcaaccgattcaaactcaaacattctg
tcttctccaagtatcacggtaatggataacggcgaggcttcattcattgtgggtgaagag
gtgcccgttctaaccggttctacagcaggttcaagcaacgataatccattccaaactgtt
gaacgtaaagaagtgggtattaagctaaaagtcgtgccgcaaatcaatgaaggtgactcg
gttcaactgcaaatagaacaagaagtatcgaacgtattaggggcaaacggggcagtagat
gttcgttttgctaagcgtcagctaaatacgtcagtgattgttcaagatggtcaaatgctg
gtgttgggtggcctgattgatgagcgcgcattggagagtgagtctaaggtcccattcttg
ggtgatattcctgttcttggacacctgttcaaatcaaccagtactcaggttgagaaaaag
aacctaatggtattcatcaagccaaccattattcgtgatggcatgactgcagatggtatc
acgcagcgcaaatacaactttattcgtgctgagcaactgtacaaggcagagcaaggcttg
aaactgatggctgacgataatatccctgtgttacctaaatttggtgaaagcatgaatcat
cctgctgaaatccaagccttcatcgatcaaatggaagcagaataa

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