Vibrio atlanticus: VS_0160
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Entry
VS_0160 CDS
T00812
Name
(GenBank) DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VS_0160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsp03021
]
VS_0160
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0160
Enzymes [BR:
vsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VS_0160
Transcription machinery [BR:
vsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VS_0160
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VS_0160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
CAV17192
UniProt:
B7VHI0
LinkDB
All DBs
Position
1:complement(155690..155962)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDSLVPEENDKPTVIALREIEEGLIT
KDVLDARERQEQQEQEAAELAAVSSIAHTR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgttgaaaaagttggcaaccgtttcgacctagtt
cttattgcggctcgccgcgcacgtcaaatgcaaactggcggcaaagattcactagtgcct
gaagaaaacgataagccaacggttatcgctcttcgcgaaatcgaagaaggtcttatcact
aaagacgtactagatgctcgtgagcgtcaagagcaacaagagcaagaagcggctgagctt
gcagcagtaagcagcatcgctcacactcgctga
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integrated database retrieval system
