Vibrio atlanticus: VS_0188
Help
Entry
VS_0188 CDS
T00812
Symbol
waaF
Name
(GenBank) ADP-heptose:LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00540
Lipopolysaccharide biosynthesis
vsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VS_0188 (waaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
VS_0188 (waaF)
Enzymes [BR:
vsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
VS_0188 (waaF)
Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
Core region
VS_0188 (waaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CAV17220
UniProt:
B7VHK8
LinkDB
All DBs
Position
1:183492..184547
Genome browser
AA seq
351 aa
AA seq
DB search
MKILIIGPSWVGDMVMSQGLYIELQRQYPDAKIDVLAPAWCKPILERMPQVNQALEMPLG
HGQFDLKSRYKIGKSLREVQYDKAYVLPNSAKSALIPLFARVPERVGWKGEMRFGLLNDV
RTNKKAFQYMLERYVALAHPKAEMTGSGCLGELPSLPFPSLQVVNSSQQEAMEQFGLNNQ
RPVLGLCPGAEFGPAKRWPDNHFATAATAMIKQGYQVWLFGSAKDREVTQKIIEQVPVNM
QQHCFNLAGDTSLIQAVDLIGACRTVVSNDSGLMHVAAAVGCNVVAVYGSSSPKYTPPLT
NKLAIINTDIECRPCFERTCPKQHLKCLTELMPSRVISAIEQFDVISQGKI
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgattattggcccgtcatgggttggagacatggtaatgtctcaaggctta
tatattgagttgcaaagacagtatcctgacgcaaaaattgatgttttagcgccagcgtgg
tgtaagcctattttggaaagaatgccacaagtcaatcaagctcttgaaatgccactaggg
catgggcaatttgatctgaaatctcgttataagatcggtaaatcgttgagggaagtacag
tacgataaagcgtacgtattacctaactccgcgaaatcagctttaattcccctgtttgct
cgcgttcctgaacgagttggttggaaaggtgaaatgcgttttggtttgctaaatgacgtt
agaaccaataaaaaagcgtttcaatacatgttagagcgatatgtagcgttagcgcaccct
aaagctgaaatgacgggtagtggttgtttaggtgaattaccatcattacctttcccaagt
ttgcaagttgttaactccagccaacaagaggctatggagcaatttggtttaaacaatcaa
aggcctgtccttggtttatgtcctggtgctgagtttggccctgcgaaacgttggcctgat
aatcactttgcaacagcagcgacagcgatgataaagcaaggttaccaagtgtggttgttt
ggctcggctaaagatcgtgaagtaacccaaaagataatcgaacaagtccctgttaatatg
cagcagcattgcttcaatttagctggagatacgagcttaattcaggctgtagacttgatc
ggggcttgtcgtactgtcgttagcaatgattctgggttgatgcatgtggccgccgcggtg
ggctgtaatgtcgtggctgtttatggctctagttcacctaaatatacgcctccgctaacg
aacaaactggcgatcatcaataccgatattgagtgccgaccttgctttgaacgaacttgt
cccaagcagcacctaaagtgcctcactgagttaatgccgagtagagtcattagtgctatt
gagcagtttgatgttatttcccaaggcaaaatataa
DBGET
integrated database retrieval system
