Vibrio atlanticus: VS_0189
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Entry
VS_0189 CDS
T00812
Symbol
waaA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00540
Lipopolysaccharide biosynthesis
vsp01100
Metabolic pathways
Module
vsp_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VS_0189 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
VS_0189 (waaA)
Enzymes [BR:
vsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VS_0189 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VS_0189 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VS_0189 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VS_0189 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
Lipid A
VS_0189 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
CAV17221
UniProt:
B7VHK9
LinkDB
All DBs
Position
1:184561..185880
Genome browser
AA seq
439 aa
AA seq
DB search
MSIVVRWAYTALLFLVSPILLWGLYRSKANKPPFGHRWKEHFGFTPPIKNRQSGVIWIHA
VSVGEVLASKKLVEQLAIQNPDKRILITTTTSTGAEQVEKMSGSISHRYMPIDFSWCVQR
FINRVQPDNMLIIETELWPNTINTVAKNDIPMILVNGRLSEKSASNYQKMSSLICPTISK
FSLILTVHSDDKSRFELLGAPSEKVIVTGSIKYDVSIDNNVIAQGEHLKDILGQGRQIVV
AASTHAGEDEQIFRAYQQAKIQLPELLLVIVPRHPERFDSVAELAKNQGLVLVRRTEVVE
ELPLDVDVYLGDTMGELMVMLSASDLVFMGGSLLGKKVGGHNFIEPALLQKYCLTGPSYF
NFADLANQLIDSSALSVVADENELALQMNSALSKPKELIEKGRIGYGIVQQNQGALQQTL
QLIHHSATNNQSTNIETSP
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtcgttcgttgggcctataccgcgctacttttccttgttagccctattctg
ctttggggcttatatcgctccaaagcaaacaaaccgccttttggtcatcgctggaaagag
catttcggatttacaccgcctattaagaatagacaatcgggtgtgatttggattcatgcc
gtttcagtaggggaagtgctggcgagtaaaaagttagttgaacaactggcgatacaaaac
ccagataaaagaatactgatcactacaacaacgagtacaggcgctgagcaggtcgaaaag
atgagcggttcgattagccatcgttatatgcctattgattttagttggtgtgttcaacgt
tttatcaaccgcgttcagccagataacatgctcattattgaaacggaattatggccaaac
accattaacaccgttgctaaaaatgatattccgatgatattagttaatggacgattatcc
gaaaaatcagccagtaattatcaaaaaatgagttcgttaatttgtccgacaatttctaag
tttagtttaatattgacggtacactctgatgataaatctcgatttgagttactaggtgca
ccgagcgaaaaagtcattgtcacaggctcaattaagtacgatgtgtcgattgataataat
gtaatcgcacaaggcgagcatcttaaagatattttggggcagggtaggcagattgttgtt
gccgcgagcactcatgctggtgaagatgaacaaatttttagagcttaccaacaagccaag
atccaactgccagaattgctgttagtgatagtgcctcgtcatcctgaacggtttgattca
gttgctgaattggccaaaaaccaaggcttagttttggttcgtcgaaccgaagttgttgag
gagttaccgctcgatgtcgacgtctacttgggggatacgatgggagagcttatggttatg
ctttctgcgagcgatcttgtctttatgggaggaagcctacttggaaagaaagtaggaggg
cataacttcatcgaacctgcgctgcttcaaaaatactgcttaacagggccgagctatttc
aattttgcagacctggcgaatcaattgatcgactcgagcgcactgtctgttgtagccgat
gagaatgagcttgctttacaaatgaacagtgcattatccaagcctaaagagttaattgaa
aaaggacgaataggctatggtatagttcaacagaatcaaggtgcgttacaacaaacactc
caattgatacatcattctgccaccaataatcagtcaaccaatattgagacatcaccatga
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