Vibrio atlanticus: VS_0193
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Entry
VS_0193 CDS
T00812
Name
(GenBank) putative LPS core biosynthesis-related protein: heptosyltransferase (waaQ, rgaQ)
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00540
Lipopolysaccharide biosynthesis
vsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VS_0193
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
VS_0193
Enzymes [BR:
vsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
VS_0193
Lipopolysaccharide biosynthesis proteins [BR:
vsp01005
]
Core region
VS_0193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
CAV17225
UniProt:
B7VHL3
LinkDB
All DBs
Position
1:188310..189410
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AA seq
366 aa
AA seq
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MNDSCSYQKILVVATHCIGDSLLISAFTHSLRKAFPTATIDVLVNARGEMVFGTNPDVDS
LVEIPPRASVKDYYRILKTHGRYDLVVNEMLNDRTAIYSFIFGKKRLGAIDESLSGAWVK
KLIYTHYIKEQHRFEHKMSRVARMLDTIDVNCIARLVSPEELLPSVVQKRLPSNYIVVHA
PSSNEIKQWPVSYWVEVINRLISAGYNIVLSGAKLERDETIVEQIISQVPESNQLVSVLG
ELSLAQTSVLIKHSDGFVGPDSGPGHLASGYSIPIVSIISVAPASMWSPWPYEEPIDVTN
NLYSNGVSSQRVANIRLVQSERNCVPCYKNRCQISDDVYSPCLQDIKPDNVVSAVLEMMP
LESINE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatgtagttaccaaaaaatattagttgttgccactcattgcattggtgat
agtttgttgatctctgcttttacccatagtctgagaaaagcgtttccgaccgcaacaata
gatgttttagttaatgctagaggggagatggtttttggtaccaatccagacgttgactct
ttagttgaaattccgccaagagcatccgttaaggactattaccggattttaaaaacgcat
ggtcgatatgatttagtcgtcaatgaaatgcttaatgatagaaccgctatctatagtttt
atctttggtaagaaaagacttggtgcaattgatgaatcgctttctggcgcctgggttaaa
aagttaatttatactcattacattaaagaacagcatcgctttgagcataaaatgagtcgc
gttgctcgtatgctggataccatagatgttaattgtattgcacggcttgtatctcccgaa
gagttattaccttcagtggttcaaaagagattgccatcaaactacattgttgtgcatgcg
ccatcctccaacgaaattaagcagtggccagtctcgtattgggttgaagtcatcaatcgt
ctgatatctgcaggttataatattgtcttatctggcgctaaattagaacgagacgagacc
attgttgaacaaatcattagccaagttcctgaatcgaatcaactggtcagtgttttgggg
gagttatcattagctcaaacctctgtattaataaaacacagtgatggttttgttggacct
gatagtggcccgggtcacctcgcatcaggttactctatcccaattgtatctattattagc
gtagcgccagcaagcatgtggtcaccttggccatatgaagagccaattgatgtaacgaac
aatttatacagcaatggtgttagctcccaaagagtcgccaatattagacttgtgcaatct
gaacgtaactgcgtcccttgttataaaaacagatgtcaaattagcgatgatgtctattcg
ccatgccttcaagatatcaagccagataacgttgtttctgctgttctagaaatgatgcca
ttggaatcgatcaatgaataa
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