Vibrio atlanticus: VS_0323
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Entry
VS_0323 CDS
T00812
Name
(GenBank) Single-strand binding protein (SSB) (Helix-destabilizing protein)
KO
K03111
single-strand DNA-binding protein
Organism
vsp
Vibrio atlanticus
Pathway
vsp03030
DNA replication
vsp03430
Mismatch repair
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VS_0323
03430 Mismatch repair
VS_0323
03440 Homologous recombination
VS_0323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_0323
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0323
03029 Mitochondrial biogenesis [BR:
vsp03029
]
VS_0323
DNA replication proteins [BR:
vsp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VS_0323
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
VS_0323
TLS (translesion DNA synthesis) factors
Other SOS response factors
VS_0323
Mitochondrial biogenesis [BR:
vsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
VS_0323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
TFIIA
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
CAV17332
UniProt:
B7VI95
LinkDB
All DBs
Position
1:316458..317015
Genome browser
AA seq
185 aa
AA seq
DB search
MASRGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVAL
FGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRAQG
GAPAQGGMGNNQQQGSWGQPQQPQQQQQQYSAPAQQQPKAPQQAPQQAQPQYNEPPMDFD
DDIPF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggctagccgtggagttaacaaagttatattagtgggtaacctaggtaatgaccctgaa
attcgttacatgccaaatggcggtgcagtagcgaacattaccattgcaacgtcagagtca
tggcgtgacaaagcaactggcgaacagcgcgaaaaaacagaatggcaccgtgttgctctg
tttggcaagctggcggaagttgctggtgagtacctacgtaaaggttctcaagtttacatt
gaaggtcaacttcaaacgcgtaaatggcaagatcaaagcggtcaagatcgctacacaaca
gaagtcgttgttcaaggcttcaacggtgtaatgcaaatgcttggcggtcgtgctcaaggc
ggtgctcctgcccaaggtggtatgggtaacaaccaacagcaaggtagttgggggcagcca
cagcagccacaacaacagcagcaacaatacagtgcgccagctcaacagcagccgaaagca
cctcaacaagctcctcagcaggctcaacctcaatataatgagccgccgatggattttgat
gatgacatcccattttaa
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