KEGG   Vibrio atlanticus: VS_0408
Entry
VS_0408           CDS       T00812                                 
Name
(GenBank) putative general secretion pathway protein A
  KO
K02450  general secretion pathway protein A
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsp02044]
    VS_0408
Secretion system [BR:vsp02044]
 Type II secretion system
  General secretion pathway protein
   VS_0408
SSDB
Motif
Pfam: AAA_22 GspA_C39-like AAA_16 PG_binding_1 AAA_30 AAA_19 SLFN-g3_helicase TniB TsaE AAA AAA_5 AAA_14 AAA_7 ResIII Helicase_RecD TrwB_AAD_bind AAA_18 AAA_11 ABC_tran NPHP3_N RsgA_GTPase cobW PIF1 Sigma54_activat NTPase_1 AAA_25 AAA_24 NB-ARC nSTAND3 T2SSE DUF5906
Other DBs
NCBI-ProteinID: CAV17416
UniProt: B7VIW2
LinkDB
Position
1:413468..415138
AA seq 556 aa
MYKEYFGFVEMPFSIVPNSRYLFLSQRHQEAIQNLQAGLGEGGGFAMLTGEVGTGKTTVA
KAMLSSLDNQTQAGLILNPTFSNSDLLEAICDEFEVEYPEQASLKQLSQAIHHFLLDSHA
EGIQTLLVIDEAQHLAADVLEQLRLLTNLETDNRKLLKVLLVGQPELQQHLQTTQLRQLA
QRITGRYHLLPLNTEETGKYIAFRLETAGGEQMLFSNRSIKLIAQYTHGIPRLINLVCDK
ALQLAFHDGEQLPSNETVNRACQQVMSFQADVYHVEKPRTSRAATKLFQYAGIATLSVGL
AIATFNFAPSYINAWLPTDASDEAKTEVLAHTQRSLVSDVPKLVAEPKPAKFELPQHIQQ
HLMQGTNRSLAIKDLYTLWGYQSSLRDGLCLSEPQSVFVCDQQQANLDTLLELGVPVVLN
LDIDQKPVFAVLYGVSKDSVELLVNEKLLVMPKQSLEQIWQGDYVAIWKQPLRETLKEGY
QGEAVALLDLLLSEVLGEVVSGSDVFDYELKMKIEAFQTWQGMSVDGIAGKLTLARLQRL
AQLDSPKLMSLEGGES
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtataaggaatattttggcttcgttgagatgccattttcgattgtaccaaattctcgc
tatttgtttttgagtcagcgtcaccaagaagctatacaaaacctacaagccggtttaggt
gagggggggggatttgcgatgcttactggtgaagtaggtacaggaaaaacaacggtcgcc
aaagcgatgttgtcatcactcgataatcagactcaagctggccttatactcaaccctacg
ttttccaattcagatttacttgaagctatctgcgatgagtttgaggtcgaataccctgaa
caagcgtcgttaaaacagctgagtcaggcaattcatcacttcctgcttgatagccatgct
gaaggcattcaaaccttattggtgatcgatgaagcccaacacctcgctgccgatgtgttg
gagcagttacgccttctaacaaacttggaaaccgacaatcgtaagctgttaaaagtactg
ttggtcggccagccggaattacaacagcacttacaaaccacgcagctacgtcagctagca
cagcgcattaccggtcgttatcacttactgcctcttaataccgaagaaacgggcaagtac
atcgcgtttcgtttggaaacggcgggtggcgagcagatgttgttttcgaaccgttctatc
aagctgatcgctcaatatacgcatggtattccaaggctcattaacttggtgtgtgacaaa
gcactgcagttggcttttcatgatggagagcagctaccgagcaatgaaacggttaaccga
gcatgtcagcaggttatgtcctttcaggctgatgtgtatcacgtcgagaaacctcgaact
tctcgtgctgcgaccaagttattccaatacgcagggattgcgacgttaagcgttggtctt
gcaattgcgacctttaatttcgctccaagctatatcaatgcttggttgcctacggatgct
tcagatgaagcgaagacggaagtgttagcacacactcagcgttctttggtatcagatgtt
cctaagttggtagctgagccaaaacctgccaagtttgaattgccacaacacattcaacaa
catttgatgcaggggaccaatcgttctcttgctatcaaagacttgtatacgttgtgggga
tatcaatcttcactgcgtgatggattgtgcttaagtgagccacagagtgtttttgtgtgt
gatcagcaacaggccaatttggatacattgttagaactaggcgtgcctgtggtgcttaat
ctcgacatagaccaaaaaccagtgtttgctgtgctgtatggcgtgtctaaggattctgtc
gagttgctggttaatgaaaagctgttggtgatgccgaagcaatccttagagcaaatctgg
caaggcgattacgtcgctatttggaagcagccgctgcgagagacactcaaagaaggctat
caaggtgaagcggttgctttgcttgatctactgctttctgaagtattaggagaggttgtt
tccggtagtgatgtatttgattatgagttaaaaatgaaaatcgaagcatttcaaacgtgg
cagggtatgtctgttgatggcattgcaggtaagctcaccttggcaagattgcagagatta
gctcaactcgattcgcctaagttgatgtcactagaagggggcgaaagctaa

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