Vibrio atlanticus: VS_0440
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Entry
VS_0440 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsp03009
]
VS_0440
Enzymes [BR:
vsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
VS_0440
Ribosome biogenesis [BR:
vsp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VS_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
CAV17448
UniProt:
B7VIZ4
LinkDB
All DBs
Position
1:449831..450697
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AA seq
288 aa
AA seq
DB search
MTDNKTLLTESPTLYIVPTPIGNLGDITQRAIEILSSVDVIAAEDTRHTGKLLAHFNIST
RTFALHDHNEQTKAQVLVERLLEGQSIALVSDAGTPLISDPGYHLVSQCRQAGVRVVPLP
GACAVITALSASGLPSDRFSFEGFLPPKSKGRKDKFLEIAKAERTCIFYESPHRITDSLQ
DMLEILGPDREVVLARELTKTFETIQGLPLGELIEWIEEDANRKRGEMVLLIHGHREEAS
TELPDEATRTLGILTKELPLKKAAAMTAEIYNLKKNALYKWGLEHLDN
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacagataacaaaaccttgctcacagagagccctactctctatattgtgccaacccca
atcggaaatttgggagatatcactcaaagagcaattgaaattttatcaagtgtcgatgtt
attgcagccgaagacacacgccacacgggtaagctgcttgctcacttcaatatatcaacc
agaacgttcgctttacatgatcataatgaacaaactaaagcacaagttctagtcgaaagg
ttattagaaggtcagtctatcgcattagtctctgatgcgggtactcctttaatcagtgat
ccaggttaccatcttgtctcacaatgtcgtcaagcgggtgtgagagttgtgccacttcct
ggtgcttgtgctgtgattaccgcactaagtgcgtctggtttgccgtctgatcgtttcagc
tttgaaggtttcttaccgccaaagagcaaaggtcgtaaagacaagttcttagagatcgca
aaagcagaacgcacgtgtatcttctacgaatctccgcaccgtattactgattctctacaa
gacatgctagagatcttaggccctgaccgtgaggttgtgttggcgcgtgagctaaccaaa
accttcgaaaccatccaaggtctgccacttggtgaacttattgagtggattgaagaagac
gcaaaccgtaaacgcggtgagatggtattgctaattcacggtcaccgtgaagaagcgagc
acagagttgccagacgaagcgactcgcacgctgggtattctaaccaaagaactgccactt
aaaaaagcagcggcgatgacggcagaaatctacaatctgaaaaagaacgctttatacaaa
tggggcctagagcatctagacaactag
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