Vibrio atlanticus: VS_0501
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Entry
VS_0501 CDS
T00812
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VS_0501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0501
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VS_0501
DNA repair and recombination proteins [BR:
vsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VS_0501
Prokaryotic type
VS_0501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAV17506
LinkDB
All DBs
Position
1:520448..521122
Genome browser
AA seq
224 aa
AA seq
DB search
MSAPKTWESIINDERDKEYFQSVLAFVEQQRNSGKTVYPPQEQVFSAFDMTPFESVRVVI
LGQDPYHGANQAHGLAFSVLPGVKIPPSLRNMYKELAQDIEGFEIPSHGYLDSWASQGVL
MLNTVLTVEEAKAHSHAKCGWETFTDAIIAELNQRSEPIIFLLWGAHAQKKGQAIDADKH
HVLVAPHPSPLSARRGFFGCQHFSTTNKLLSSMDQQSIDWRLPT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccaaaaacttgggaatccattattaatgatgaacgtgacaaagagtacttt
cagagtgtcctcgcgtttgttgaacagcaacgcaatagtgggaaaaccgtctaccctcct
caagagcaggtgttcagtgcctttgatatgacgcctttcgagtccgtacgcgtggttatc
ctggggcaagatccttatcacggcgctaaccaagctcatggcttagctttttctgtactg
ccaggtgtaaaaatccctccttctctacgtaatatgtacaaagagcttgcacaagatata
gagggctttgagatcccgagtcatggctacctcgattcttgggcatctcaaggggtgttg
atgttgaacactgtccttacagtagaagaggcaaaagcccactcacatgctaagtgtggt
tgggaaacctttaccgatgccattattgcagagctcaatcagcgctctgaaccgatcatc
ttcttgttgtggggcgcacacgcccagaagaaaggccaagcgattgatgcagacaagcac
catgtgttggttgcacctcatccatcaccattatcagcacgccgtggtttcttcggttgt
cagcacttctcaacaaccaacaagctactttcttctatggatcaacaatctatcgactgg
cgtttaccaacataa
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