Vibrio atlanticus: VS_0555
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Entry
VS_0555 CDS
T00812
Name
(GenBank) Biofilm architecture maintenance protein mbaA precursor
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VS_0555
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VS_0555
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GGDEF_GdpP
HAMP
PUF_NOP9
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
CAV17560
UniProt:
B7VJN6
LinkDB
All DBs
Position
1:complement(578602..580980)
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AA seq
792 aa
AA seq
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MKLSTKILLVIAPVILISTAASSYIIYSTQKNSFIKREDNALQLSMEKLAGYFQQSRSFL
NNYSYTLTNSDLVKRYFMVDENVDHQRELTDNLNETIKLLQDGNDSFTRVALLDSDRALK
YYADNTNDPFAKMDPKILEFIEHQYQKTLATSSTDYIQNSQGEGVLVHYDVIDKKTVSTP
INDPPNNVFFVVVSVSLDKFNSLRKQIEFDYQTSLFFTPTLVTQGRELTQSIKLAPGLYA
TLDPAPFLLDNKLKSIWNELSLSFALSAFVSVTLLLILLSRWVINPITRLDRQLQEVEKK
QRKNIERLGTNDELGRLSQRFYDMYQELDDTYQQTKLLAENDQLTQIANRHQFQTFVQQS
LSKPSSNTETWVLYFDLDNFKFVNDKYGHQIGDSILVSFAQRISNICNHYKTELNAHCLP
ARLSGDEFVVYLNAPNHQENIAHRFSNDLLTPLQKGFVTESGNFPITVSIGIATHPNDGD
TIEKLLSNADTAMYQAKRAGKNQFADYSLDLDKTIQRQASIESALRENNFDEEFKLVYMP
YMDSTGSYIIGVEVLLRWHSKHLGLVPPDEFIPIAEQTGLFEIIDRWVIQNAFASFHQLQ
AQFDHSIQLSINLSSAGIKTTHLADFIKEHAKINQIPPNLIDFEITETFYSNSQGFPLLN
QLSYMGYRLAIDDFGSGYTSITQLVQYPTQKIKLDKTFLDTLIETDNQNIVKPIIGLCHA
QGKKVTAEGIETQCMHQWLQDAQCDMLQGYYFGKPMPLEELTEWYRQHQLNFIDNKKNQP
HEICNHRIAESS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaagtactaaaatattacttgtgattgcccccgtaatactgatcagtacagcg
gcttctagctatatcatctattccacgcaaaaaaacagctttatcaaacgtgaagacaat
gcactgcaattaagcatggaaaaattagcaggctattttcaacagtctcgttctttcctc
aacaattactcctacaccctcaccaatagtgacctggttaagcgttattttatggttgat
gaaaatgtcgaccaccaacgtgaactgactgataatctgaacgaaacgattaagttactg
caagatggtaacgacagttttacaagggtcgcgttgcttgatagcgatcgagctcttaaa
tattacgctgacaataccaatgatcctttcgcaaaaatggatcccaagatattagagttc
attgagcatcaatatcaaaaaacgttagcaacttcgagtacggactacatacagaattcc
caaggtgaaggggtattagttcattatgatgttattgataaaaaaacagtttcgacgcca
ataaacgatccacccaacaatgtgttttttgtggttgtatctgtctctcttgataagttt
aattcactacgaaaacagatagagttcgactatcaaactagtttgttttttacccctacg
ttagtgacacaggggcgtgagttaacacaatctataaagctagcacctggcctctacgcc
acgctcgatcctgcaccattcttattagacaacaaactcaaatctatctggaatgaactg
agcctatcctttgccctatctgcatttgtcagtgttaccttactgctgatcctgctatct
cgctgggtgataaacccgatcacccgtttagataggcagcttcaagaggttgagaaaaaa
cagagaaaaaacattgagcgcctaggaacaaatgatgagttggggcgcttatcccaacgc
ttttatgatatgtaccaagagttggatgacacgtaccaacagactaagttgttggcagaa
aatgatcagttgacccaaatagccaataggcaccagtttcaaaccttcgtgcagcagtcg
ttgtcaaaacctagctcgaacaccgaaacctgggttctctactttgatttagataacttc
aaatttgtgaacgacaaatacggacaccaaatcggcgactcgattctcgtcagttttgct
cagcgtatctccaatatttgtaaccactacaaaacagaattaaatgcccactgtctgcca
gcccgactttctggggacgagttcgttgtataccttaatgctccaaatcaccaagaaaat
atcgcacatcgattttcgaatgatttactcaccccactacaaaaggggtttgtcaccgag
tcaggtaatttcccgattacggtcagtattggtattgcgacccaccctaatgatggcgat
acaatcgagaagcttctttcgaatgctgataccgcgatgtatcaagccaaacgtgcaggt
aaaaaccaattcgcagattactcgttagacttagataaaaccattcagcgtcaagccagt
attgagagcgccctcagagaaaataattttgatgaagagtttaagctcgtttacatgcct
tatatggactcaacaggaagctatattattggtgtagaggtgctattacgttggcactcg
aaacaccttggtttggtgccacccgatgaattcattcctatcgccgaacaaaccggatta
tttgaaataattgatcgctgggtgatccagaatgcatttgcttcattccatcaacttcaa
gctcaattcgatcactctattcagctatcgattaacttatcttcagccgggattaaaacc
actcaccttgctgatttcatcaaagagcatgcaaaaatcaatcaaatcccgcccaatttg
atcgattttgaaatcacagaaaccttttactcaaactctcaggggttcccattacttaac
cagttatcatacatgggctatagattagcaatcgacgactttggttctggttacacctcg
atcactcaactggttcaatatccaactcagaagattaaattggataaaacctttttggac
accttgattgagacagataaccagaacatagtgaaacccattatcgggctatgccatgct
caagggaaaaaggtcacagccgaagggattgaaactcaatgcatgcatcagtggttacaa
gatgcgcagtgcgatatgctgcaaggctattattttggtaagcctatgccattagaagag
ctgacggaatggtaccgacagcatcaactcaattttatcgataataaaaagaatcaacca
catgaaatctgtaatcatcgcatcgctgaatccagctaa
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