Vibrio atlanticus: VS_0622
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Entry
VS_0622 CDS
T00812
Name
(GenBank) putative lipoprotein
KO
K17713
outer membrane protein assembly factor BamB
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_0622
Transporters [BR:
vsp02000
]
Other transporters
Pores ion channels [TC:
1
]
VS_0622
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_FAM234A_B
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-ProteinID:
CAV17617
UniProt:
B7VJU1
LinkDB
All DBs
Position
1:643913..645073
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AA seq
386 aa
AA seq
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MKKMFPKAALCAIALGLLAGCASEEDTVIMAPVPTVNSEFTPSQEWSTSVGDGVGHYFSK
LTPELAYDKVFVASREGMVKALDPETGKELWKVDLEKEVLARLSGGLTAAYGKVFVGSEN
GEVIALDESTGEELWRVSVNGEVLASPATESNMVIVHTSRGMLTALDQESGEQKWTISTE
VPSLTLRGDSSPVTVSGGVFWGTANGRLAAAIVDRGQLIWQQPVGTPKGATEIDRLVDVD
ASPVVLGGTLYTVGINGQLIAIDLRSGKPVWKRNYSSAIDLASDGSRLFVVTDKDHVVAV
DARSGTELWSTPLLENRLLTAPAIINGYVVVGDTEGYLHWLDRSSGEFVAQQLVDGSGFA
VAPIEMPEGYLVTTRNGDVKKLTISQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatgtttccaaaagcggcgttgtgtgcgattgctcttggcctgctagcgggc
tgtgcaagtgaagaagacaccgtaatcatggcaccagtaccaacggtaaacagcgagttt
actcctagccaggaatggtctacgtcggttggtgatggtgttggtcactacttttcaaaa
ctaacgccggaattggcttacgacaaagtatttgttgcaagccgtgaaggtatggttaaa
gcgcttgaccctgaaacaggtaaagagctttggaaagtcgatcttgagaaagaagtactg
gctcgtttatcgggtggcttaacggcagcttacggtaaggtatttgttggttctgaaaat
ggcgaagtgatcgcactggatgaatcaaccggtgaagagctgtggcgtgtatcagtgaat
ggtgaggtgcttgcatcccctgcaactgaaagcaacatggttattgttcataccagtcgt
ggcatgttgaccgcgttagatcaagaaagcggtgagcaaaaatggaccatcagtacagaa
gtaccaagcctaacacttcgtggcgatagctcacctgttacggtttcaggtggtgtattc
tggggtacggcaaatggtcgtttagccgcagctatcgttgatcgtggtcagcttatttgg
caacagccagtaggtacgccaaaaggcgcaacggaaattgatcgtttggttgatgttgat
gcatcaccggttgttcttggcggcaccctatataccgtaggtatcaatggtcaactgatt
gctatcgatcttcgttctggtaagccagtttggaaacgtaactactcgtcagcgattgat
ttagcaagtgatggcagccgtttgttcgttgtgactgacaaagaccatgtggttgcggtt
gatgcgcgtagtggcactgaactttggagcactccattgttagaaaaccgcttactgaca
gcacctgctattattaatggttatgtagttgtgggtgatacagaaggttatctgcactgg
ttagatcgttcatcgggtgagtttgttgctcaacagctcgtcgatggtagcggttttgcg
gttgcgccaattgaaatgcctgaaggctacttagtgacgactcgcaatggcgatgtaaag
aaactaacgattagccaataa
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