Vibrio atlanticus: VS_0673
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Entry
VS_0673 CDS
T00812
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VS_0673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0673
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VS_0673
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VS_0673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CAV17667
UniProt:
B7VJZ1
LinkDB
All DBs
Position
1:701936..705412
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AA seq
1158 aa
AA seq
DB search
MFTVYHSNKVDTLKILLVHLIKSDPLANPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWDMFTQVLPDVPKRSAFNKEAMTWKLMSLLPAKLDHPDFLPLQRYLENDED
DSKLYQLAEKIADIFDGYLVYRPEWMAMWEAGEPVAELIDDEGQQEHPWQPILWQALYEK
TLSQGQSKYHRGNLYHDFIEALAKQQGQLQHLPKRLFVFGISSLPPRYMDALKALGEQID
VHLMFTNPCQHYWGDIRDRKYLARVEAQRRKQFALVDGLPELEGEASPLKDGIEANVEDE
LHTSQAVGNSLLASMGKLGRDNLFLLSQSDSEEHEFFIDVERDNLLHQLQADILQLEEHQ
DDHILDSSNHKQVVELGDRSLTVHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVS
DINAYSPAIQAVFGNAPGERYIPYSISDRTADQESPILTAFMQLVALPNTRCLASELLEL
LEIPAMMARFGIDEFQFEQAKQWVEEAGIRWGVDASTATEFDLPATEQNTWLFGIQRMLL
GYAMSDSAGLFETEHSPIAAYNEVQGINAELAGKLAHFIDRIAHYRQRLTETQSIDMWRE
TLLQMIDDFFAVELEGEVVLKSIRDALSQLNEQLDDALYEQELSPSIIYQYLNNKLSGAR
ISQRFLAGQVNFCTLMPMRSIPFKTVCLLGMNDGVYPRSMPPEGFDLMNGRTRPCDRSRR
DDDRYLFLEAMLSAQECLYISYVGRSIQDNTERVPSVLVSELIEYCQQNYCLSEDQALPS
DDSGINLTQAISFEHTMTPFSPVAFTQGDASHVLSYAKEWLPAANRSGERSGEFNRALDD
YLLGATYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFVLNGLESFQLK
DALLQVLLDHPEGAGEAVRLFVSEQKAQGRLPVGAFGDIEFETNRVQAEDLAQEIRFVSG
SPQQDLEVNIEFDVLGEGKPVRLMGWLTQNYQSGLVRFRSGKIRSQDYLAAWIDHLCCAV
MEHGKTTHIIGYDRKEGVVHQTLQPIGDAQQAKSLLVELVRLFYQGMTAPLPYFPKTALA
DVEAGFSRGKWVDDEEKSLKKMADTFNDSFAFTGEGRDTYISRIWPKWDDELATESRMYS
TLVLQAARLAAADLEEQE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttaccattccaataaagtcgatactttaaaaatccttctcgttcactta
atcaaaagtgatcctttagccaatcctttcgaaaaagagcagatcttggttcagagccca
ggtatgtctcaatggcttaagatggaactcgccaaagagtttggcgtagcagcaaatatc
gatttcccacttccagcaaccttcatttgggatatgtttacccaagtgcttcctgatgta
cctaaacgcagtgcttttaacaaggaagcgatgacatggaagctgatgagtttgctaccc
gctaagcttgaccaccctgattttttacctctacaacgctaccttgaaaacgacgaagat
gattcgaagttgtatcaattggcagagaaaattgccgatatcttcgatggttacttggtg
tatcgacctgaatggatggcgatgtgggaagcgggagagcccgttgcagaacttatcgat
gatgagggacaacaagagcacccttggcaaccgattttgtggcaagcactctatgagaaa
accttgtctcaaggccaatctaaatatcaccgtggcaacttgtatcacgacttcattgaa
gcgctagccaagcaacaaggtcaactgcaacatctgcctaaacgcttatttgtgtttggt
atttcttcgctgcctcctcgctacatggatgcattgaaagcgcttggcgagcagattgat
gtgcacttgatgtttaccaatccttgccaacattactggggcgatattcgcgatcgtaaa
tacttggcaagagtcgaagcgcagcgccgtaaacagtttgctctggttgatggtttacct
gaattggaaggtgaagcttcaccactgaaagatggcattgaagccaacgttgaagacgaa
ctacacaccagccaagctgtcggtaatagcttgctggcgtctatgggaaagctgggcaga
gataacctgttcttgctatctcaatcagacagcgaagagcatgagttctttattgatgtt
gagagggataacctgctgcatcaattgcaagctgatattcttcagttagaagagcatcaa
gacgaccacatcttagattctagcaaccataaacaggtggttgagcttggcgatcgctct
ctgaccgtacatgcgtgtcacagcccaatgcgtgaggtggaagttcttcatgaccagtta
ttggcgatgtttgatgccgacccgaccctgaaaccacgcgatatcatcgtaatggtatct
gacattaatgcttatagcccagcgattcaggcagtatttggtaatgctccgggtgagcgt
tatatcccttactcgatctctgatagaaccgcagaccaagaaagcccaattctgaccgct
ttcatgcagttagtcgcgctaccgaacacgcgctgtttagcctctgagttgctagagctg
ttagaaattcctgcgatgatggcacgctttggtattgacgagtttcaattcgagcaagct
aagcaatgggttgaagaagcgggtatccgttggggggtcgatgcttcaacggcgacagaa
tttgatctacctgcgaccgagcaaaatacttggctctttggtatccagcgcatgttgttg
ggctatgcgatgtcggattctgcgggtttatttgaaactgaacactctccgattgccgct
tataacgaagttcagggtattaacgccgaacttgcaggtaagttagcgcactttatcgat
cgtattgcccattaccgtcaacgcctgactgaaacacaatctatcgatatgtggcgtgag
accttgctgcaaatgattgatgatttctttgcggttgaactggaaggcgaggtggtgctt
aagtcgatacgtgatgcgctttcgcaactgaatgaacagcttgatgatgccttgtatgaa
caagagttgtcgccaagcattatctaccagtacctcaataataagttatctggcgcgcgt
attagccagcgattcttagctggccaagttaacttttgtaccttgatgccgatgcgttct
attccgttcaaaaccgtctgtttgttaggtatgaatgatggtgtttaccctcgctcaatg
ccgccagaaggttttgatctaatgaacggacgcacacgtccgtgtgaccgttctcgccgt
gatgatgaccgctatctattcttagaagcaatgttgtcggctcaagagtgtttatacatc
agttatgtcggccgctcgattcaagataatactgagcgagtgccgtcggtattggtttca
gagttgattgaatactgccaacagaattactgtttgagtgaagaccaagccttaccaagt
gatgattcaggtatcaacctgactcaagcgatcagctttgaacacaccatgacaccgttt
agcccagtagcttttactcaaggtgatgcgagccatgtgctgagttacgccaaagagtgg
cttcctgcggctaaccgttccggtgaacgcagtggtgaattcaatcgtgcattggatgat
tatttgttgggtgcgacgtacccgttagaactcgacttggttgagttacagcgtttttgg
cgtttgccagtgcagtacttctttaatcgccgcctaaaagtggtatttgagccgccactt
cctgtgatggaagatgatgagccatttgtacttaatggtttagagagtttccaacttaag
gatgctttgctgcaagtgctactggaccaccctgaaggcgcaggcgaagccgttcgattg
tttgtctctgagcaaaaagcacagggccgattaccggtcggcgctttcggggatatcgaa
tttgaaaccaaccgtgttcaagcggaagacttagcccaagagattcgatttgtgagcggc
tcgccgcaacaagatctcgaagtgaatatcgaatttgatgtgttaggcgaaggcaaacct
gttcgcttgatgggttggttaactcaaaactatcaatcgggtctagttcgtttccgtagc
ggtaaaatacgctctcaagattatttggctgcgtggattgatcatctatgttgtgcagtc
atggaacacggaaaaacgacccatattattggctacgacagaaaagagggcgttgttcac
caaacgctacagcctatcggcgatgcgcagcaggcgaagagcttgttggttgaattagtg
cgactgttttatcaaggcatgacagcaccgctaccttatttcccgaaaactgcattggct
gacgttgaggctggctttagtcgtggtaaatgggtcgatgacgaagaaaagtcgctcaag
aaaatggccgatacttttaatgacagcttcgcctttacgggcgagggcagagatacttac
atctcacgaatttggccaaagtgggatgatgaactggctactgagtcgcgtatgtattca
acgcttgtgctacaggcggcaaggttggctgctgccgatctggaagagcaggagtaa
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