Vibrio atlanticus: VS_0676
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Entry
VS_0676 CDS
T00812
Name
(GenBank) putative Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VS_0676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_0676
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VS_0676
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VS_0676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
DEAD
TrwB_AAD_bind
AAA_28
PhoH
T2SSE
CbiA
AAA
NTPase_1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAV17670
UniProt:
B7VJZ4
LinkDB
All DBs
Position
1:709496..711721
Genome browser
AA seq
741 aa
AA seq
DB search
MTTTTTNTSTEAANTLKPVSLIPEQLMNVLKFLADKGSIRQLDYQFARFIAQQATSHSQE
IGFLAGVVSHELGKGHICTQLIQQHKAGPEQTTDLAQLLGLYGETALQLNQKLLGIDWVT
VLQSSNLVGTTNDCVKPLMFDGQRVYLQRYWNYEVVLAETLNRLSKPVEFNIEQKKALTE
TLNQLFARSYHFLFNALTKAEANQQTSQVLRQQLVCDHLDIVDEQALDWGSIDQAIVQAK
QVTDLDVLDSLVPLSVCLNWQKVAAAVALSRRFAVISGGPGTGKTTTVTKLLSAMVEQSL
SQGKIPTIKLVAPTGKAAARLTESIGKAIEQLPLAPEVKANIPTESSTLHRLLGAIPNRA
EFRHNRRNPLHLDILVVDEASMVDLSMMYKLVDALPEHARLILLGDKDQLASVEAGAVLG
DICSFNSTGYSTAQGNLIAEMTGFDAIAKPRQVKTGSANPPAIADSLCMLQKSYRFDARS
GIGQLAKAINNGSANQVDQVFAKGFADIENHPLSSDSYNLMLRTLVNEYGAYLNRMNVPL
EELETQEARAKSVLDLFSQCRLLCSIREGDFGVKGLNHRIERALAARRLVNPNNDELWYH
GRPVMVTRNDHGLGLYNGDIGICMLEADVSSSSSIDDNSAPRLKVYFELPDGSVKAVLPS
RVPDHETAYAMTIHKSQGSEFDLTLMILPPDFSPILTRELIYTGITRAKKRLIMFSDTNV
LKRGIKVKTERVSGLGSRLTN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacgaccactaataccagtacagaagctgcgaacacgctaaagccagtttca
cttatccctgagcagctcatgaatgtattaaagttcctagcggacaaaggttcaattcgt
cagttggattatcaatttgcccgttttattgctcagcaagcgacgagtcattctcaagag
atcgggtttctagctggcgttgtaagccatgaattaggcaaggggcatatttgtactcag
cttatacagcagcataaggcaggccctgaacaaacgacagatctagcccagttgcttggt
ttgtacggtgaaacggcactgcaattgaaccaaaaactgttgggtattgattgggtgact
gttctgcaatcatctaacctagttggaacaactaatgactgcgttaagccgctgatgttt
gatgggcagcgtgtctacttacagcgttattggaactacgaagttgtgttggctgaaact
ctaaaccgtttaagtaagccagtagagttcaatattgagcagaaaaaagcactgactgag
acgctcaatcagctttttgcacgcagttatcacttcctgtttaatgccttaaccaaggct
gaagcaaaccaacaaacctctcaggtattacgtcagcagttagtgtgtgaccatctagat
atcgtcgatgaacaggctttggattggggttctatcgatcaagcgattgttcaagccaaa
caagtgaccgatttagatgtgctggatagtctagtgccgttatctgtctgtttgaactgg
caaaaagtagcggcagcggtggcgttaagtcgtcgcttcgcggtgatttctggtgggccg
ggtaccggtaaaacgaccacggtaactaagttgctgtcggcgatggtcgagcaatcactc
agccaaggtaaaataccgacgatcaagctggtggctccgacaggtaaagcggcggcgcgt
ttaactgagtcgattggtaaagcgattgaacaattacctctggcgcctgaagtaaaggcc
aacataccgacggaatcgagcactttgcaccgattacttggtgcgatccccaatcgagcg
gagtttagacacaaccgacgtaatccacttcaccttgatatcttggtggtggatgaagca
tcgatggtcgacttatccatgatgtataagctggtggatgcactccctgaacacgcaagg
ttgattctgcttggtgataaagaccagctcgcttcagtagaagcaggtgccgtgttgggt
gatatctgctcgtttaattcaacaggctacagcacagcgcaaggtaacttgattgcggaa
atgacaggctttgatgcgatagctaaacccagacaggtcaaaacaggatcggctaaccct
cctgcgattgccgatagtttgtgtatgctgcagaagagttaccgttttgatgcacgttca
ggtatcggacagttggcaaaggcgatcaataacggctctgctaatcaggtcgatcaagtg
tttgcgaaagggtttgcggatattgagaatcatcccttgtcgagtgacagctataacttg
atgctacgtactttagttaatgaatatggtgcgtatctgaaccgaatgaatgtgccattg
gaagagctagaaactcaagaagcgagagcgaaatcggttctcgatttgttcagccagtgt
cggttgctgtgttccattcgcgaaggtgactttggtgttaaaggcctcaaccacagaatc
gaaagggcacttgccgcaagacgcttggtgaatccgaacaacgatgaattgtggtatcac
gggcgaccagtaatggtaacgcgcaatgatcatggcttaggtttatacaatggtgatatt
ggtatctgtatgcttgaggctgatgtaagtagctcttcttcaattgatgataactcagcc
cctcgattaaaggtgtactttgaattgcccgatggcagtgtgaaagccgtgcttccaagc
agagtccccgatcatgagaccgcttatgcgatgacgatacacaaatctcaaggcagtgag
tttgatctgaccttaatgatcttaccgccagacttcagccctattttaacgcgagagctt
atctataccggtattacacgtgctaagaaacgactgattatgttcagcgacacaaatgtg
ttgaagcgtgggattaaggtgaaaacagagcgagtgagtggtttaggaagtcgattaact
aactga
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