Vibrio atlanticus: VS_0724
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Entry
VS_0724 CDS
T00812
Name
(GenBank) Hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_0724
Enzymes [BR:
vsp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VS_0724
Transfer RNA biogenesis [BR:
vsp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VS_0724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
CAV17719
UniProt:
B7VKG3
LinkDB
All DBs
Position
1:complement(760273..761697)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEVPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKEGVVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPEMIKSSLS
NEKPVMDISFPEIEKFDNLPEPKAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLFEVAQLAEQGVREVNLLGQNVNAYRGPTHEGDICSFAELLRLVASIDGIDRIRFTTSH
PLEFGDDIIEVYKDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDI
QISSDFIVGFPGESKQDFQDTMKLIKEVDFDMSFSFVFSPRPGTPAADYPCDVPAQEKKD
RLYELQQTVNTQAMRFSRLMLGTEQRILVEGPSRKNLMELRGRTENSRVVNFEGSADLIG
QFVDVKITEVYTNSLRGELVRTEKDMGLRVVMTPAEMMEKTKREDELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacttggggctgtcagatgaatgaatatgattcatca
aaaatggccgacctgcttaacgctgcaaatggctatgagctaactgaagtacctgaggaa
gcagacgtactactattgaatacttgttctatccgcgaaaaagcgcaagaaaaagtattc
caccagcttggtcgttggaaaacgcttaaagataaaaaagaaggtgtggtgatcggtgtg
ggtggctgcgtagcgactcaagaaggtgatcacattcgtcaacgtgcaccatacgtagac
gttatctttggcccacaaacattgcaccgtttgccagagatgattaagtcatcactgtct
aacgaaaagccagtaatggacatctctttcccagagatcgaaaagttcgataacctgccc
gagccaaaagctgaaggcgcgacggcgttcgtttctatcatggaaggttgttctaaatac
tgtacttactgcgttgtaccatacacacgtggtgaagaagttagccgtccaatggatgat
gtacttttcgaagttgctcaacttgcagagcaaggcgtacgtgaagttaacctgctaggt
caaaacgtaaacgcataccgcggtccaactcacgaaggtgatatctgttcattcgcagaa
ctgcttcgtcttgttgcttctatcgatggtatcgaccgtattcgtttcacaacaagccac
ccgcttgagtttggtgacgacatcattgaagtttacaaagatacaccagaactagtgagc
ttccttcacctaccagtacaaagtggtagtgaccgtattcttacgatgatgaagcgccca
catacggctatcgagtacaaatctattatccgtaaactgcgtaaagctcgtcctgacatt
caaatcagctctgactttattgttggtttccctggtgagtctaagcaagacttccaagat
acaatgaagctaattaaagaagttgatttcgatatgagcttcagctttgttttctctcca
cgtccaggtacgccagcggcagattacccatgtgatgtaccagcacaagagaagaaagat
cgtctgtacgaactgcagcaaacggtaaacacacaagctatgcgtttctctcgtctaatg
ttaggcacagagcaacgtatccttgttgaaggcccatcaagaaagaacctaatggaactt
cgcggccgtacagaaaacagccgtgttgtgaacttcgaaggttctgcagacctaatcggc
cagttcgtagatgtgaagatcactgaggtttacaccaactcactacgtggtgagctagtt
cgcacagaaaaagacatgggtctacgcgttgttatgactccagcagaaatgatggaaaaa
actaaacgtgaagacgagctaggtgtagcaacatttacgccatag
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