KEGG   Vibrio atlanticus: VS_0903
Entry
VS_0903           CDS       T00812                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vsp03016]
    VS_0903
Enzymes [BR:vsp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     VS_0903
Transfer RNA biogenesis [BR:vsp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VS_0903
 Prokaryotic type
    VS_0903
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: CAV17914
UniProt: B7VL84
LinkDB
Position
1:931912..932706
AA seq 264 aa
MKIALGIEYNGTHYFGWQRQRDVKSVQEELEKALSVVANHPVEVMCAGRTDAGVHGTGQV
VHFETNVDRKMVAWTMGANANMPKDIAVRWATEVNEDFHARFSATARRYRYIIFNHALRP
GILNSGVSHYHGHLDEKKMHEAGQYLLGENDFTSFRATHCQSRSPWRNMIHLNVTRHGHY
IVIDIKANAFVHHMVRNITGSLIAVGKGDQKPEWIQWLLEAKDRKVAGATAKAEGLYLVD
VDYPEHFGLPREPIGPLFLPDNLN
NT seq 795 nt   +upstreamnt  +downstreamnt
atgaaaattgctttaggtattgaatataacggtacccactactttggttggcagcgccaa
cgagacgtgaaaagtgtccaagaagaattggaaaaggctctttcagttgtcgcgaatcac
cctgtagaagttatgtgtgctggtcgcacagatgccggtgttcacggtacgggacaagtc
gttcactttgaaactaatgtcgatcgtaaaatggttgcgtggacaatgggcgcaaatgcc
aacatgccaaaagatattgccgttcgttgggcaacagaagtgaatgaggatttccatgct
cgtttttctgcaacagcacgccgttatcgctacattatctttaaccatgctctacgtcct
ggcattttgaattcaggtgtgagccattaccatggtcaccttgatgagaaaaagatgcat
gaagcgggtcagtacttacttggtgagaatgactttacttcgttcagggcaacacattgt
caatctcgtagcccatggagaaacatgattcacttaaacgtgactcgtcatgggcattac
atagtgatcgatattaaagcgaatgcgtttgttcaccatatggtgaggaatattactggt
agcctaattgcggtaggtaaaggtgatcaaaaaccagagtggattcagtggcttttagag
gctaaagatcgaaaagtggcaggcgcgacagcgaaagcggaaggcttatacttagtagat
gttgattatcctgaacattttggactaccaagagagcctatcggccctctatttttgccg
gataatttgaactaa

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