Vibrio atlanticus: VS_1009
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Entry
VS_1009 CDS
T00812
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00450
Selenocompound metabolism
vsp00970
Aminoacyl-tRNA biosynthesis
vsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VS_1009
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VS_1009
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsp01007
]
VS_1009
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsp03016
]
VS_1009
Enzymes [BR:
vsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VS_1009
Amino acid related enzymes [BR:
vsp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VS_1009
Transfer RNA biogenesis [BR:
vsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VS_1009
Prokaryotic type
Other AARSs
VS_1009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Etd1
PatG_D
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
CAV18060
UniProt:
B7VLW8
LinkDB
All DBs
Position
1:complement(1046063..1048123)
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AA seq
686 aa
AA seq
DB search
MATDPRQLLVTCALPYANGSIHLGHMLEHIQADIWVRYQRLRGNTVNFICADDAHGTPIM
LKAQQMGITPEEMIAAVSEEHQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFI
SSRTISQLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSG
ATPVMKDSEHFFFDLPQFESMLKEWTRSGSLQNETANKMQEWFESGLQQWDISRDAPYFG
FEIPGEKDKFFYVWLDAPVGYMASFKNLCDKRDDLNFDEYWKKDSTTELYHFIGKDIVYF
HSLFWPAMLEGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLNHLDPECLRYYYA
AKLNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSAEFAEPELYNE
FVAAAERIGQLYETREFSRAIREITALADKANQYIDEKAPWVLAKEEGKEKELQEVSSVG
INLFRVLMAYLKPVMPELAARTEAFLNEELTWEAIATPLTDHEITKFKALFSRIDPKKVE
AMIESSKEDAAAEAAAKEKAEAEKEQASQTELDKEPIADEIEFDAFSAVDMRIARIISCE
EVPKANKLLKFQLDIGGETRQVFSGIKSAYKPEELEGKLTVMVANLKPRKMKFGMSEGMI
LAAGPGGSDLWILEPHEGAQPGMRVM
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatccaagacaacttttggtaacttgtgcgcttccgtacgctaacggctct
attcaccttggccatatgcttgagcatatccaagctgatatctgggttcgataccagcgt
ctacgtggcaacactgtaaacttcatctgtgctgacgatgctcacggcacgccaattatg
cttaaagctcaacagatgggtatcacaccagaagagatgatcgctgctgttagtgaagag
catcaaaaagacttcgctggctttgatatcagctttgataactaccacagcacacatagt
gaagagaaccgtgaactggcttctcatatctaccttgagcttaaaaagaacggtttcatc
tctagccgtactatttctcagcttttcgatcctgagaaagagatgtttcttccagaccgt
tttgtaaaaggtacttgccctaagtgtaagtcagaagaccaatacggtgataactgtgat
aactgtggtgagacatacagcccaactgaactgattaatccaaaatcagcagtttctggc
gcaactccagtaatgaaagactcagaacacttcttcttcgatctacctcagttcgaaagc
atgcttaaagagtggactcgttctggatctctacaaaatgaaactgcaaacaaaatgcag
gaatggtttgagtctggcctgcaacagtgggatatctcacgtgatgcgccttacttcggc
ttcgaaatcccaggcgaaaaagacaagttcttctacgtatggttagatgcgccagttggc
tacatggcttctttcaagaacctatgtgacaagcgtgacgatctaaacttcgacgaatac
tggaagaaagatagcacaactgagctttaccacttcatcggtaaagacattgtgtacttc
cactctctattctggccggcaatgctagaaggcgctggtttccgtaagccaaacaacgta
ttcgtacacggctacgtaacggtgaacggtgcgaagatgtctaagtcgaaaggcacattc
atcaaagcaagcacgtacttaaaccacctagaccctgagtgtcttcgctactactacgct
gcgaaactaaacagccgtatcgatgaccttgaccttaaccttgaagacttcactcaacgt
gtaaacgctgatgtagtaaacaagattgttaacctagcgtctcgtaacgctggcttcatc
actaagcgtttcgaaggcaagctttctgctgaatttgcagaacctgagctatacaacgaa
ttcgttgctgctgcagagcgtatcggtcagctatacgaaactcgtgagttcagccgcgct
atccgtgaaattactgcactagctgataaagctaaccagtacatcgacgaaaaagcacct
tgggttcttgcaaaagaagaaggtaaagagaaagagcttcaagaagtttcttctgtcggt
attaacctattccgcgtgctaatggcttaccttaaacccgttatgccagagcttgcggct
cgcactgaggctttcctaaacgaagagcttacgtgggaagcgattgctactccgctaact
gatcacgaaatcactaagttcaaggcgttgtttagccgtattgatccgaagaaagtagaa
gcaatgatcgagtcttctaaagaagatgcagccgctgaagcagcagcaaaagaaaaagca
gaagctgaaaaagagcaagcaagccaaactgagctagacaaagagccaatcgcagacgag
attgaattcgatgccttttcagcagtcgatatgcgtattgctcgtattatctcatgtgaa
gaagtaccaaaagcgaacaagctactgaagttccaactggacatcggtggtgaaactcgc
caagtattctctggtatcaagtcagcgtacaaacctgaagagctagaaggcaaactaact
gtgatggtagcaaaccttaaacctcgtaagatgaagtttggtatgtctgaaggcatgatc
ctagctgctggcccaggtggcagtgacttgtggatccttgaaccacacgaaggtgctcaa
cctggcatgcgtgtaatgtag
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