Vibrio atlanticus: VS_1246
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Entry
VS_1246 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VS_1246
Enzymes [BR:
vsp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
VS_1246
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
HTH_71
BAT
Motif
Other DBs
NCBI-ProteinID:
CAV18382
UniProt:
B7VN35
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All DBs
Position
1:1337685..1339895
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AA seq
736 aa
AA seq
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MTKNMTTKPVLLTEAEIEQLHLEVGRSSLMGKTIAANAKDLEAFMCLPIDVPGHGEAGGY
EHNRHKQNYTYMNLAGRMFLITKEQKYADFVTELLEEYADKYLTFDYHVQKNTNPTGRLF
HQILNEHCWLMFSSLAYSCVASTLTQEQRDNIESRIFEPMLEMFTVKYAHDFDRIHNHGI
WAVAAVGICGLALGKREYLEMSVYGIDRNDTGGFLAQISQLFAPSGYYMEGPYYHRYAIR
PTCVFAEVIHRHMPEVDIYNYKGGVIGNTVQAMLATAYPNGEFPALNDASRTMGITDMGV
QVAVSVYSKHYSSENGVDQNILGMAKIQDAVWMHPCGLELSKAYEAASVEKEIGMPFWPS
VELNEGPEGHNGAQGFIRMQDKKGDVSQLVMNYGQHGMGHGNFDTLGISFFNRGQEVLRE
YGFCRWVNVEPKFGGRYLDENKSYARQTIAHNAVTIDEKCQNNFDVERADSVHGLPHFFK
VEDEKINGMSAFANDHYQGFDMQRSVFMLNLEELESPLLLDLYRLDSTKGGEGEHQYDYS
HQYAGQIVRTNFEYQANKELNTLGSDFGYQHLWNVASGEVKGTALVSWLQNNTYYTWLGA
TSNDNAEVVFTRTGANDPSFNLRSEPAFILRSKGETTLFASVLETHGYFNEEFEQSVNAR
GVVKDIKVVAHTNAGSVVEITTEKSNVTVMISNQLGATESTEHKVELNGKVYSWTGFYSV
ETILNPELASTAEQGK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagaatatgacgactaaaccagtattgttgactgaagcagaaatagagcaactt
caccttgaagtgggccgttctagcttaatgggcaaaaccattgcagcgaacgcgaaagac
ctagaagcgttcatgtgcttacctattgatgttcctggtcacggagaagcgggtggttac
gagcataaccgccataagcaaaactacacgtacatgaacttagctggtcgcatgttcttg
atcactaaagagcaaaagtacgctgactttgttacagaactactagaagagtacgcggac
aaatatctaacgtttgattaccacgtacagaaaaacactaaccctacaggtcgtttgttc
caccaaatcttgaacgaacactgctggttaatgttctcaagcttggcttactcttgtgtt
gcttcaacactgacacaagagcagcgtgacaacattgaatcgcgcattttcgaaccaatg
ctagaaatgtttacggttaaatacgcacacgacttcgaccgcattcacaaccacggtatt
tgggcagtagccgctgtgggtatctgtggtcttgctctaggcaagcgcgagtaccttgaa
atgtcagtgtacggcatcgaccgtaacgatactggcggctttctagctcaaatttctcag
ctgtttgcaccttctggttactacatggaaggcccttactaccaccgttacgcgattcgc
ccaacgtgtgtgttcgctgaagtgattcaccgtcatatgcctgaagttgatatctacaac
tacaaaggcggcgtgattggtaacacggtacaagcaatgctggcgacagcgtacccgaac
ggtgaattcccggctctgaacgatgcatctcgcacaatgggcatcacagacatgggtgtt
caagttgccgtcagtgtttacagcaaacattactcttcagaaaacggcgtagatcaaaac
attcttggtatggcgaagattcaagacgcagtatggatgcacccatgtggtcttgagtta
tctaaagcatacgaagcggcttctgttgaaaaagaaatcggcatgcctttctggccaagt
gttgaattgaacgaaggccctgaaggtcacaacggcgcgcaaggttttatccgcatgcag
gataagaaaggcgacgtttctcagttagtgatgaactacggccaacacggcatgggtcac
ggcaacttcgatacgctgggtatttctttcttcaaccgaggtcaagaagtgctacgtgaa
tacggcttctgccgttgggtgaacgttgagccaaaattcggcggtcgttacctagatgaa
aacaaatcttacgcacgtcaaacgattgctcataatgcagtaaccattgatgaaaaatgt
cagaataactttgacgttgagcgtgcagactcagtacacggcttgcctcacttctttaaa
gtagaagacgagaaaatcaacggcatgagtgcatttgctaacgatcactaccaaggtttt
gacatgcaacgcagcgtgttcatgttaaaccttgaagagcttgaatctccgctattgtta
gacctttaccgcttagactctacaaaaggcggcgaaggcgagcaccaatacgactactca
caccaatatgcaggtcagattgttcgcactaactttgaataccaagcaaacaaagagtta
aacacgctaggcagcgatttcggttatcaacacttatggaacgtcgcaagtggtgaagtc
aagggcacagcacttgtgagctggctacaaaacaacacgtactacacttggctaggcgca
acgtctaacgacaatgctgaagttgtctttactcgcactggtgctaacgatccaagcttc
aacctacgttcagagcctgcattcattttacgtagcaaaggcgaaacaacactgttcgct
tctgttctagaaacgcacggttactttaacgaagagttcgaacaatcagtaaatgctcgc
ggcgttgtgaaagacatcaaggttgtagcgcatacaaacgccggttcagtcgtcgaaatc
accacagagaagtcaaatgtgacagtgatgatcagcaaccaacttggcgcgactgagagc
actgaacacaaagtagaactgaacggtaaagtatacagctggacaggattctactcagta
gaaacaattttaaacccagaattagcaagcacagcagagcaggggaaataa
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