Vibrio atlanticus: VS_1247
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Entry
VS_1247 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VS_1247
Enzymes [BR:
vsp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
VS_1247
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
DSE-like_N
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
CAV18383
UniProt:
B7VN36
LinkDB
All DBs
Position
1:1339898..1342066
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AA seq
722 aa
AA seq
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MSYQPLLLNFEEAAELRKELGKDSLLGNALTRDIKQTDAYMAEVGIEVPGHGEGGGYEHN
RHKQNYIHMDLAGRLFLITEETKYRDYIVDMLTAYATVYPTLESNVSRDSNPPGKLFHQT
LNENMWMLYASCAYSCIYHTISEEQKRLIEDDLLKQMIEMFVVTYAHDFDIVHNHGLWAV
AAVGICGYAINDQESVDKALYGLKLDKVSGGFLAQLDQLFSPDGYYMEGPYYHRFSLRPI
YLFAEAIERRQPDLGIYEFNDSVIKTTSYAVFKTAFPDGTLPALNDSSKTISINDEGVIM
ATSVCYHRYEQTETLLGMANHQQDVWVHASGKTLSDAVNAADDIKAFNWGSLFVTDGPEG
EKGGVSILRHRDEQDDDPKTADTMALIWFGQHGSDHQYHSALDHGHYDGLHLSVFNRGHE
VLHDYGFGRWVNVEPKFGGRYIPENKSYCKQTVAHNTVTVDQKTQNNFDTALAESKFGQK
HFFVADDQSLQGMSGTISEYYTGVDMQRSVILAELPEFEKPLVIDVYRIEADAEHQYDLP
VHHSGQIIRTDFDYNIESTLKPLGEDNGYQHLWNVASGKVNQEGSLVSWLHDSSYYSLVT
SANAGSEVIFARTGANDPDFNLKSEPALILRQSGQNHVFASVLETHGYFNESIEASVGAR
GLVKSVSVVGHNSVGTVVRIQTTSGNTYHYGISNQAEDTQQATHTVEFAGETYSWEGSFA
QL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaaccacttttacttaactttgaggaagcagcagagcttcgtaaagaactt
ggcaaggatagccttttaggtaacgcactgactcgcgatattaaacaaactgacgcttac
atggcggaagttggcattgaagtaccaggtcacggtgaaggcggcggttacgagcacaac
cgtcacaagcaaaactacatccatatggatctagcgggccgtttgttccttatcactgag
gaaacaaagtaccgtgattacatcgttgatatgctaacagcgtacgcgacggtgtaccca
acacttgaaagcaacgtaagccgtgactctaaccctccgggtaagctgttccaccaaacg
ttgaacgagaacatgtggatgctttacgcttcttgtgcgtacagctgtatttaccacacc
atttctgaagagcaaaagcgtctgatcgaagacgatcttcttaagcaaatgatcgaaatg
ttcgttgtgacttacgcacacgacttcgatatcgtacacaaccacggcttatgggctgtg
gcagcggtaggtatctgtggttacgcaatcaacgatcaagagtcagtagacaaagcgctt
tacggcctgaaactcgacaaagtaagcggtggtttcttagcgcaacttgaccaactgttc
tcgccagacggctactacatggaaggtccttactaccaccgtttctcactacgtccaatc
tacttgttcgcagaagcgattgaacgtcgtcagccagatcttggtatttacgaattcaac
gactcagtgatcaagacaacgtcttacgcggtattcaaaacggcattcccagacggtaca
ttgccagctctgaacgattcatcgaagacgatttctattaacgatgaaggcgttattatg
gcaacgtctgtgtgttaccaccgctatgagcagactgaaactttacttggtatggctaat
caccaacaagatgtttgggtccatgcttcaggtaaaacgctatctgacgctgtcaatgca
gcagacgacatcaaagcattcaactggggtagcctgtttgtaacggacggccctgaaggc
gaaaaaggcggcgtaagcattcttcgtcaccgtgacgaacaagacgatgaccctaagacc
gcagatacaatggcgttgatctggtttggtcaacacggcagcgatcaccagtaccactct
gcgctagaccacggtcactacgatgggctacacctaagcgtattcaaccgtggccacgaa
gtgctgcacgattacggcttcggtcgctgggtaaacgttgagcctaagtttggcggtcgt
tacatcccagagaacaagtcttactgtaagcagacagttgctcacaacacagtaacggtt
gatcagaaaacacagaacaacttcgatacggcattggctgaatctaagtttggtcagaag
cacttcttcgtagcagacgaccagtctctgcaaggtatgagcggcacaatttctgagtac
tacaccggcgtagacatgcaacgcagcgtgattcttgctgaacttcctgagttcgagaag
ccactagttatcgatgtataccgcatcgaagctgacgctgaacaccagtacgacctaccc
gttcaccactcgggtcaaatcatccgtactgacttcgactacaacatcgaaagcacgctg
aagccgctaggtgaagacaacggttaccagcacttatggaacgttgcttcaggcaaagtg
aaccaagagggctctctggtgagctggctacatgacagcagctactacagcctagtaacc
agcgcgaatgcgggcagtgaagtaatctttgctcgcactggtgctaacgatccagacttt
aaccttaagagtgagcctgcgcttatcttacgtcagtctggtcaaaaccacgtgtttgct
tctgtactagaaacgcatggttactttaacgagtctatcgaagcctctgtaggcgctcgt
ggtctggttaaatcagtgtctgttgtgggccataacagtgtcgggactgttgttcgcatt
cagactacttctggtaatacttaccactacggtatttcaaaccaagctgaagacacgcag
caagcaactcacactgttgagttcgcgggtgagacatactcgtgggaagggtcatttgct
caactgtaa
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