Vibrio atlanticus: VS_1254
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Entry
VS_1254 CDS
T00812
Name
(GenBank) Conserved hypothetical protein
KO
K22110
oligogalacturonate-specific porin family protein
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_1254
Transporters [BR:
vsp02000
]
Other transporters
Pores ion channels [TC:
1
]
VS_1254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdgM
OMP_b-brl
Porin_4
Motif
Other DBs
NCBI-ProteinID:
CAV18391
UniProt:
B7VN43
LinkDB
All DBs
Position
1:complement(1350954..1351688)
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AA seq
244 aa
AA seq
DB search
MNKTKIVIAVASVLAAGSVSAASFDMRHEYKSHTDQHATRVKLGDSIGNFLVDIEAKFKG
EDGEFMEDLKNNGWELGLNYRHVLNDNWTMTYGMPIEGRESGVTYKPQVRATYSVDSIDG
LSLSARYRYDMRQNTKSIATDSDGKPILDNGYLTYQNDENQRRHRLTANINYSMENWRFG
FEGNYYKADDYNIYDNDDTNYELNASIRHIMGQWAPYVEFGDVSTSSTKATRELRSRVGL
TYSF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactaaaatcgtgattgctgtggcatctgtactcgctgctggctctgtatct
gcggcgtctttcgatatgagacacgaatacaagagtcatacagatcaacacgctactcgt
gtaaaactgggcgatagcattggcaacttccttgtagatatcgaagcgaaattcaaggga
gaagacggcgagtttatggaagatttgaagaataatggttgggaacttggtcttaattat
cgccatgtgcttaacgataactggacgatgacttacggtatgccaatagaaggtcgcgag
tctggtgtcacatacaaacctcaagttcgcgcgacatacagtgtcgacagcattgacggt
ttaagcctaagtgcacgttaccgttacgatatgagacagaacacaaaatcaattgcaact
gactcggacggcaagcctatcttagataacggctacttaacttatcaaaacgatgaaaac
caacgtcgccatcgcttaacagcaaacatcaactactcaatggagaactggcgtttcggt
tttgaaggtaactactacaaagcagatgattacaacatctacgacaacgatgatacaaac
tacgagttaaatgcaagtattcgccacattatgggtcaatgggcaccatatgtagagttt
ggtgatgtgagcacttcatcgactaaagcgactcgtgaactgcgtagccgtgttggtcta
acttacagcttctaa
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