KEGG   Vibrio atlanticus: VS_1376
Entry
VS_1376           CDS       T00812                                 
Symbol
hsdR
Name
(GenBank) Type I restriction enzyme EcoKI, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vsp02048]
    VS_1376 (hsdR)
Enzymes [BR:vsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VS_1376 (hsdR)
Prokaryotic defense system [BR:vsp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VS_1376 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 SLFN-g3_helicase AAA_19 PhoH AAA_22 UvrD-helicase SNF2-rel_dom DUF4407
Other DBs
NCBI-ProteinID: CAV18539
UniProt: B7VNG3
LinkDB
Position
1:1485564..1489127
AA seq 1187 aa
MAKSNFEFLKGINDFLYAIARAAEKNYPDDPNTTLVKLRIFGEATAKHLAKLLDIEVPEN
QHELLRELGKIPFVDDSILNVFHKLRKIGNQAVHEYHDDLQDAEMCLRFAFRLAVWYYRL
VTKNYDFPVPHFVLPSSDSGEQFEQEVLSLKHELALARQSESQAKEQSKAELDAQQAKLT
ALNGYISVLESKQEETHEQSQARIGALEAKLKEQETELSKKTEVERKAYKKQIIEEAKSR
PLNLSEDETRYLIDNQLRKAGWDADTKKLNFANGTRPRVGRNIAIAEWPTGKDETGKTGF
ADYVLFVGLKPLGVIEAKKNNKDVSAKLTEAYRYSKYFDNDFLRSELQQAANGQDELDQV
AEALPTYLPSWADSHGSSTLKMQEFKVPFCFSANGRGYKAAAKTKSGIWYRDVRHATNMP
KALPEWHRPEELVAKLESDDQLTNNWFSRNADMSDLGLRYYQEEAVQATEQAIVNGQQDI
LLAMATGTGKTRTAIALMYRLIQSQRFKRVLFLVDRTSLGKQALDSFEDTNIKGDTFNSI
FNVKGLTDRFPEDSTKIHVATVQSLVKRTLQSDEVMPVGRYDCIIVDEAHRGYILDKEQT
EGEEKFRSEQDFISSYRRIIDHFDAVKVALTATPALHTIDIFGGEQKKPVYRYSYRKAVI
DGYLTDQEPPIRIITKLSESGLYLSQGSEVQRLSNQGELINDTLDDEQGFEVADFNRALI
ASNFNKVVCEELVNHIDPTNPQKTLVFCVNNTHADSVVEELRTAFKAKYSQLEHDAIIKI
TGDSDKDSTKVQSMITRFKKERLPNIVVTVDLLTTGIDIPSICNLVFMRKVRSRILYEQM
KGRATRLCPAVGKTAFKIFDAVDLYSTLQSVDTMRPVVVRPKVELQTLVNEITDSETYKV
IEADGRSFAEHSHEQLVAKLQRISSHAEFNRLKSREIDSQIKRFDEICQDSAGCNFASLA
KTLKQKGPKWSAEVFNKVTNMVGRLEQLKQEINDLRDMPIFTDVDDSLLRVETVYGEHET
AQDFLEAFDALVDKSSNQQEALDVIINRPRDLTRKGLLELQEWFDAQNFNEPTLKKAWKE
TKNQDVAARLIGHIRQAAIGDALLPFEERVDQALEKIKAQKEWSEEQLNWLDRLASSIKD
KVVLDDDTFKTGNYKRKGGKRKLMNVFNDELDSILTQFNEFMWDEPA
NT seq 3564 nt   +upstreamnt  +downstreamnt
atggctaaatcaaacttcgaattcctcaaaggcattaacgatttcttgtacgctattgct
cgcgcagcagaaaaaaactatccagatgatccaaacaccacgctagttaaattgcgtatc
tttggtgaagcaacggccaaacacttagctaagctgctagatatcgaagttcctgaaaac
cagcacgaactcttacgtgaactcggcaaaattcctttcgttgatgacagcattctcaac
gtcttccataagctacgtaaaataggcaaccaagccgtacatgaatatcatgatgatctt
caagatgcagaaatgtgtctgcgttttgcttttcgcttagcggtttggtactaccgactt
gttaccaaaaactatgactttcctgtccctcattttgttttaccaagctcagatagcggt
gaacagtttgaacaagaagtgttgtcgctaaaacatgaattggcattagctcgtcaaagt
gaaagccaagcgaaagaacagtcgaaagcagagctagatgcgcaacaggcgaaactaaca
gcgctgaatggctacatctccgttttagagagtaagcaagaagaaacacatgaacagtct
caagctcgaattggcgcacttgaagcaaaacttaaagaacaagaaactgagctttctaag
aaaacagaagtcgaacgcaaagcttataagaaacagatcatcgaagaggcgaagtcacgc
cctctaaatctaagcgaagatgaaactcgctacctgattgataaccagctgcgcaaggcc
gggtgggatgcagacaccaaaaagctaaattttgccaatggtactcgccctcgagtaggt
cgcaatattgcaatcgcagagtggccaacaggcaaagatgaaaccggtaaaacaggtttt
gctgattacgtattgtttgtcggtttaaagccgttgggcgtcattgaagcgaagaagaac
aacaaagatgtttcagctaaactgacagaagcttatcgctacagtaagtactttgataac
gattttctgcgttctgaattacaacaagccgcgaatggtcaagatgaactcgatcaagtt
gctgaagctttacctacttacttaccttcgtgggcagattcgcacggctcctcaactctc
aaaatgcaagagttcaaagtcccattctgtttttctgccaatggtcgtggctataaagcg
gcagcgaaaaccaaaagtggtatctggtatcgagacgttcgtcatgccaccaatatgccc
aaggcattgcctgaatggcaccgacctgaagagttagttgccaagctagaaagtgatgat
cagctaaccaacaactggtttagccgaaatgcagacatgagcgacctcggtttacgttac
tatcaagaagaagcggtgcaagcgaccgagcaggccattgttaatggtcagcaagatatc
ttgttagccatggcgacaggtactggtaaaacacgtactgcgattgccttaatgtatcgc
cttattcagtctcagcgatttaagcgcgttctgttcttggtcgatcgcacctcactgggt
aagcaggcgttagattcgtttgaagacacgaatatcaaaggggatacctttaactcgatc
ttcaatgtgaaagggttaacagatcgcttccctgaagacagcaccaagatccacgttgcc
actgttcagtctctcgttaagcgcacgctacaaagtgatgaagtcatgccagtagggcgt
tacgactgcattattgtcgatgaagctcatcgtggttacattcttgataaagagcaaacg
gaaggagaagagaagttcagaagcgaacaagactttatctcttcttatcgccgtatcatc
gatcacttcgatgcggtgaaagtcgcgttaaccgcaacacctgcgttgcacaccattgat
atcttcggtggagagcagaagaagcccgtttaccgttatagctaccgaaaagcggtaatc
gacggttacttgaccgatcaagaaccgccaattcgcatcattaccaagctcagtgagtct
gggttgtatttatctcaaggtagtgaggttcaacgcctctctaaccaaggcgagttaatc
aatgacaccttagatgacgaacaaggttttgaagtcgctgatttcaaccgtgcgctcatc
gcttcaaacttcaataaagtggtgtgtgaagagttggtcaatcatatcgatccaaccaac
ccacaaaagaccttagtcttctgtgttaacaacactcatgccgattctgtggtcgaagag
ctgcgtactgcgttcaaagccaaatattctcagcttgagcacgatgcgatcattaaaatc
actggcgactcagacaaagactccaccaaagtccaatctatgatcactcgctttaaaaaa
gagcgtttacccaacatagttgtcaccgtggatttgctcacaacgggcattgatatacca
agcatttgtaacttggtgttcatgcgtaaggttcgtagccgtatcttgtatgagcagatg
aaaggccgtgcaacgcgtttatgcccagccgtcggtaaaaccgcttttaaaattttcgat
gcggttgatctgtattcgacattgcaaagtgtcgataccatgcgcccagtcgtggttcgt
ccaaaggtagagctgcaaaccttagttaacgaaattacggattctgaaacctataaggtc
attgaggcagatggtcgaagctttgcagagcacagccatgaacagctggttgccaagcta
caacgaatctcaagccacgcggagtttaaccgacttaaatcacgcgagatagacagccaa
atcaaacgctttgatgaaatttgccaagactcagcaggctgtaactttgcgagccttgct
aaaacactcaaacaaaaaggccccaaatggtcagcagaagtgttcaacaaggtgaccaat
atggtcggccgtttagagcagttaaagcaagagatcaacgatttgcgtgatatgccaatc
tttaccgatgtggacgattcgttactgcgagtagaaaccgtgtatggcgagcatgaaacc
gcccaagatttcttagaagcttttgatgcgctggtggacaaatcatccaaccaacaagag
gcgttagatgtgatcatcaatcgcccaagggacttaactcgtaaaggcttgttagagctg
caagagtggttcgatgcacaaaatttcaatgaaccaacgctgaaaaaagcgtggaaagaa
accaaaaaccaagatgtcgcagcgcgcttaattggtcacattcgacaagctgcaattggt
gacgcattgctgccattcgaagagcgagtagatcaagcgctagaaaaaattaaagcgcaa
aaagagtggagtgaagagcaactcaactggctcgatcgcctagcgtcatccatcaaagac
aaagtagtactcgatgatgacacctttaaaacgggcaactacaagcgtaaaggtggcaaa
cgtaagcttatgaacgtctttaatgatgaattagacagcatactcacccaattcaacgag
tttatgtgggacgagcccgcgtaa

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