Vibrio atlanticus: VS_1455
Help
Entry
VS_1455 CDS
T00812
Name
(GenBank) putative integrase/transposase
Organism
vsp
Vibrio atlanticus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_29
HTH_32
HTH_28
HTH_Tnp_1
rve_3
rve
HisK_sensor
Sortase
Motif
Other DBs
NCBI-ProteinID:
CAV18618
UniProt:
B7VNP2
LinkDB
All DBs
Position
1:complement(1587283..1588665)
Genome browser
AA seq
460 aa
AA seq
DB search
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGA
QSLTHAARGRPSNRRYSEHFRIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQW
MIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDWFEGRSDKCCLLVFIDDATGR
LMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFA
KPAQYPKNMHRPVRESKQELDDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHET
VKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNKRLGQVLKFAQQQQEEFEQQQ
QRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggtctgcttaggagttatctggatgcttattactatgagtgaaaaagatattcatcga
ttcaaggttctgactgacgtacgtgaaaaacgactacgccaagttgacgctgctatcatt
ttgaacctgtctgcgcgtcatatccgacgtttggtaaacaaacttgtctctcttggcgcg
caaagtcttacacacgcagcgcgtggacgcccaagtaatcgacgctactcagaacatttc
agaattgaaatactgaaacttatccgtgagcattactctgacttctcaccaacgttcgct
ctggaaaaactgactgaactgcacaatctatcagtctctaaagaaacactgcgtcaatgg
atgatcgccgacggactgtggcttccacatgcgaaacgaaaacctcggatctatcagcct
cgttaccgtcgtgattgcttgggtgaacttattcaaattgacggctcccatcatgactgg
tttgaaggccgcagcgacaaatgctgcctattggtgttcattgacgatgcgactggccgc
ttgatgaacctaagattcagcgaaacggaatccgcgtttgactacatgttggcgacgcgt
gaatacctcaatgagcacggtaaacccatcgcattttacagcgacaaacactccatattt
cgagtgaatcaggagaaacacaaacaagttggccaaacccaatacgggcgcgtgctgaaa
gagctggcgatagaactcatttgtgccaacagctcccaagccaaaggccgtgttgagcga
gccaatctcacgttgcaagaccggctggttaaagagatgcgcttacaaggcatcaacacc
atcgagcaagccaacgcctggcttccctacttcatcgccgattttaaccaccgctttgct
aagcccgctcaatacccgaaaaacatgcatcgtccggttcgagaatccaagcaagaactc
gacgatattttcagttggcaagaaagccgcaagctctcaaaatcactgacatttcaatac
gataaagtaatttatctcattgagcccaccgaagaaaacagccgattaatgcacgaaacc
gtgaaggtactcgactacccaaatggagaaatcgccattcagtacgggcatcgaaaactc
gaattcaaaaccttcgacaaactcgagcacgttcaacaaacccaaatcgtcgacaacaaa
cgcctcggccaagttttaaaatttgctcagcaacaacaagaagaattcgaacaacaacag
caacgaacccgcagtaagaaagcccccaagcgccgtgcacaacaaagagccctacaaacc
gcgcctcgagccatcaaccctgtcctcatcgaaccattcaaagcctccagtcgaaagacc
taa
DBGET
integrated database retrieval system
