Vibrio atlanticus: VS_1620
Help
Entry
VS_1620 CDS
T00812
Name
(GenBank) Deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_1620
Enzymes [BR:
vsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
VS_1620
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
VS_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CAV18795
UniProt:
B7VP56
LinkDB
All DBs
Position
1:1736224..1737795
Genome browser
AA seq
523 aa
AA seq
DB search
MNFKTVRLVLGDQLNIEHSWFRQVNDDVIYIIAELKQETDYVASHIQKVAAFFCAMGYFA
DGLKEQGHQVLHLTLDDTTQFENLDKLLKHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLT
NATKGCCDTEHFLLPFEEIEQQFPKDKHIMMEHFYRRMRKRFDILLEDGKPVGGKWNYDA
NNRKKLKKQDIENLPQPLMFTNDITDILQRIERHQVQTIGQVGSQLLWPVKRAQSLSLLA
HFCQVCLPLFGQFQDAMTTDHDSKWSLYHSRISFSLNSKLLSPKEVIDAALSAYQASSHR
DSSSNKPNIDIAQVEGFVRQILGWREYIRAVYWANMPAYANKNHYSADNNLPHYFWDGQT
KMNCMKHAIDQSLEFAYAHHIQRLMITGNFCLITGIDPDQVDNWYLGIYVDAIEWVEMPN
TRGMALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNL
HRDALNRNPRMGMLYRSWDNMDEQSQQAILDTAEQRITNLENL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaaaccgtgcgccttgtcttaggcgaccagctaaatatagagcactcatgg
tttcgacaggttaacgatgacgttatttacatcattgctgagctcaaacaagaaacggat
tatgttgcatctcacattcaaaaagtggccgcgtttttctgtgcgatgggttacttcgct
gacggactaaaagaacaaggccatcaagtactccacctaactcttgacgacacaacgcaa
tttgaaaacctagataaacttctaaagcactatgtacatgaattcggcgcagagaagttt
gaatatcaaaggccagatgaatatcgcctcttagagcagatgaataagctcaagctcacc
aatgcgaccaaaggctgttgtgatacggaacacttcctcttgccattcgaagagatcgaa
caacagtttccgaaagacaaacacatcatgatggagcacttctatcgccgaatgagaaag
cgtttcgacattttgttagaagacggaaagcccgttggtggcaaatggaattacgacgcg
aacaatcgaaagaaactcaagaaacaagacattgaaaacttacctcagcctctgatgttt
accaatgacataacagacattttgcagcgtatcgagcgccaccaagtgcaaaccattggt
caagtcggtagccaattattatggccggtgaaacgcgcacaaagtttgtctctgctcgct
catttctgccaagtctgcttaccgttatttgggcagtttcaagatgcgatgacgacagac
cacgactctaaatggagcttgtatcatagccgcatttcgttctcgctgaacagtaaactg
ctgagccctaaagaagtgattgatgcagcactgtcggcctaccaagcatccagtcatcga
gacagttcttcaaataaaccaaacatcgacattgcacaagtcgaagggtttgtacgccaa
atactggggtggcgagagtacatacgcgccgtctattgggcaaacatgcctgcttacgcc
aacaaaaaccattattcagcagacaacaacctgccccattacttttgggacggacaaacc
aagatgaactgcatgaagcatgcgattgaccagtctctcgagtttgcttacgcgcaccac
atccaaaggttaatgatcactggcaacttctgcttaattacgggtatagaccccgaccaa
gtagacaattggtacctcggtatttacgtcgacgcaattgagtgggttgaaatgccaaat
acgcgaggtatggcactgtttgcggatggcgggatcgtcggaaccaaaccatactctgcc
agcggttcctatatcaaccgcatgagtgactactgcaaaggctgtcactacaagataaaa
gaacgcagcggcgagcaatcttgccctttcaatagcttgtattggcgctttatgaacctg
caccgcgatgcgttaaaccgcaacccacgaatgggtatgctatatcgctcttgggacaac
atggacgagcaatcacaacaagcgattctcgataccgctgaacaacgaatcacaaacttg
gagaacttataa
DBGET
integrated database retrieval system
